Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 SNORA62.3-201ENST00000365110 153 ntBASIC4.16□□□□□ -1.74
MSH4O15457 AL359837.1-201ENST00000381357 287 ntBASIC4.16□□□□□ -1.74
MSH4O15457 Z86062.1-201ENST00000406773 777 ntBASIC4.16□□□□□ -1.74
MSH4O15457 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
MSH4O15457 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.16□□□□□ -1.74
MSH4O15457 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.16□□□□□ -1.74
MSH4O15457 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.16□□□□□ -1.74
MSH4O15457 YWHAEP5-201ENST00000431545 765 ntBASIC4.16□□□□□ -1.74
MSH4O15457 NDUFB1P1-201ENST00000435191 180 ntBASIC4.16□□□□□ -1.74
MSH4O15457 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.16□□□□□ -1.74
MSH4O15457 AC092809.1-201ENST00000441469 474 ntBASIC4.16□□□□□ -1.74
MSH4O15457 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.16□□□□□ -1.74
MSH4O15457 AL513343.1-201ENST00000451818 792 ntBASIC4.16□□□□□ -1.74
MSH4O15457 FGF7P3-201ENST00000454645 303 ntBASIC4.16□□□□□ -1.74
MSH4O15457 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.16□□□□□ -1.74
MSH4O15457 RPL21P129-201ENST00000491732 478 ntBASIC4.16□□□□□ -1.74
MSH4O15457 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.16□□□□□ -1.74
MSH4O15457 AC010627.1-201ENST00000503819 1294 ntBASIC4.16□□□□□ -1.74
MSH4O15457 PAICSP4-201ENST00000517543 1253 ntBASIC4.16□□□□□ -1.74
MSH4O15457 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.16□□□□□ -1.74
MSH4O15457 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.16□□□□□ -1.74
MSH4O15457 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.16□□□□□ -1.74
MSH4O15457 EIF1P6-201ENST00000600054 334 ntBASIC4.16□□□□□ -1.74
MSH4O15457 CR589904.2-201ENST00000612533 440 ntBASIC4.16□□□□□ -1.74
MSH4O15457 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.16□□□□□ -1.74
MSH4O15457 AL392048.1-201ENST00000613946 534 ntBASIC4.16□□□□□ -1.74
MSH4O15457 AC245389.2-201ENST00000616023 576 ntBASIC4.16□□□□□ -1.74
MSH4O15457 AC242843.1-201ENST00000618702 573 ntBASIC4.16□□□□□ -1.74
MSH4O15457 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
MSH4O15457 AC112200.1-201ENST00000625015 234 ntBASIC4.16□□□□□ -1.74
MSH4O15457 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.16□□□□□ -1.74
MSH4O15457 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.16□□□□□ -1.74
MSH4O15457 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
MSH4O15457 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
MSH4O15457 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MSH4O15457 AC245054.1-201ENST00000420944 258 ntBASIC4.15□□□□□ -1.75
MSH4O15457 CR848007.2-201ENST00000424918 787 ntBASIC4.15□□□□□ -1.75
MSH4O15457 USP12PY-201ENST00000427677 1064 ntBASIC4.15□□□□□ -1.75
MSH4O15457 MTND4LP14-201ENST00000429447 288 ntBASIC4.15□□□□□ -1.75
MSH4O15457 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.15□□□□□ -1.75
MSH4O15457 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.15□□□□□ -1.75
MSH4O15457 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.15□□□□□ -1.75
MSH4O15457 AL451050.1-201ENST00000450126 415 ntBASIC4.15□□□□□ -1.75
MSH4O15457 RNU6-1218P-201ENST00000458990 108 ntBASIC4.15□□□□□ -1.75
MSH4O15457 APOOP2-201ENST00000461561 539 ntBASIC4.15□□□□□ -1.75
MSH4O15457 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.15□□□□□ -1.75
MSH4O15457 AC005912.1-201ENST00000495392 255 ntBASIC4.15□□□□□ -1.75
MSH4O15457 BTF3L4P4-201ENST00000506381 449 ntBASIC4.15□□□□□ -1.75
MSH4O15457 HMGN1P11-201ENST00000508668 303 ntBASIC4.15□□□□□ -1.75
MSH4O15457 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.15□□□□□ -1.75
MSH4O15457 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.15□□□□□ -1.75
MSH4O15457 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.15□□□□□ -1.75
MSH4O15457 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.15□□□□□ -1.75
MSH4O15457 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.15□□□□□ -1.75
MSH4O15457 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.15□□□□□ -1.75
MSH4O15457 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.15□□□□□ -1.75
MSH4O15457 AL163642.2-201ENST00000604722 1019 ntBASIC4.15□□□□□ -1.75
MSH4O15457 AC010200.2-201ENST00000605098 235 ntBASIC4.15□□□□□ -1.75
MSH4O15457 AC242628.1-201ENST00000606810 391 ntBASIC4.15□□□□□ -1.75
MSH4O15457 AC012467.1-201ENST00000607740 256 ntBASIC4.15□□□□□ -1.75
MSH4O15457 AC104307.1-201ENST00000616142 196 ntBASIC4.15□□□□□ -1.75
MSH4O15457 MIR4727-201ENST00000622232 55 ntBASIC4.15□□□□□ -1.75
MSH4O15457 AP000553.6-201ENST00000641242 118 ntBASIC4.15□□□□□ -1.75
MSH4O15457 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MSH4O15457 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.15□□□□□ -1.75
MSH4O15457 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
MSH4O15457 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MSH4O15457 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MSH4O15457 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH4O15457 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH4O15457 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MSH4O15457 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
MSH4O15457 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MSH4O15457 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH4O15457 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.14□□□□□ -1.75
MSH4O15457 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MSH4O15457 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MSH4O15457 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
MSH4O15457 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MSH4O15457 RNU6-883P-201ENST00000384597 107 ntBASIC4.14□□□□□ -1.75
MSH4O15457 MIR23B-201ENST00000384832 97 ntBASIC4.14□□□□□ -1.75
MSH4O15457 ATP5A1P2-201ENST00000412323 255 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AC073136.2-201ENST00000417282 849 ntBASIC4.14□□□□□ -1.75
MSH4O15457 RPS12P5-201ENST00000423449 371 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.14□□□□□ -1.75
MSH4O15457 RSL24D1P8-201ENST00000434442 492 ntBASIC4.14□□□□□ -1.75
MSH4O15457 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.14□□□□□ -1.75
MSH4O15457 AC092013.1-201ENST00000438795 332 ntBASIC4.14□□□□□ -1.75
MSH4O15457 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
MSH4O15457 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms