Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA3F8WFD2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA3F8WFD2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA3F8WFD2 EOGT-210ENST00000615922 1931 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC008033.1-201ENST00000216407 1162 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 MIR331-201ENST00000362302 94 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 RNU1-87P-201ENST00000363727 170 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 RNU6-1293P-201ENST00000384077 107 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 SNORA70C-201ENST00000384538 135 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 SNORD96B-201ENST00000386148 79 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 SFR1P1-201ENST00000403720 688 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 RPL23AP26-201ENST00000412728 464 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 RPS27AP12-201ENST00000429552 465 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 YWHAZP8-201ENST00000436935 731 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 AL121877.1-201ENST00000453704 622 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC012158.1-204ENST00000483430 465 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 OR5H4P-201ENST00000510851 923 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 TCP11X3P-202ENST00000514289 1254 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 RNA5SP446-201ENST00000515955 82 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 RNU6-202P-201ENST00000515998 96 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 snoZ278.1-201ENST00000517059 112 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC134698.5-201ENST00000519444 336 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 NDUFS5P6-201ENST00000529136 295 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 OR8I1P-201ENST00000529291 931 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC007224.1-201ENST00000564410 144 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 AL445567.2-201ENST00000618935 498 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 VN1R7P-201ENST00000619242 903 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 RNU6-156P-201ENST00000621869 107 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC140113.4-201ENST00000622087 222 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC099654.9-201ENST00000637055 678 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 AC138393.1-206ENST00000540997 1886 ntBASIC4□□□□□ -1.77
NPIPA3F8WFD2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA3F8WFD2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA3F8WFD2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPIPA3F8WFD2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPIPA3F8WFD2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NPIPA3F8WFD2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC012020.1-201ENST00000624541 1728 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 SGO1P1-201ENST00000603525 1447 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 RNU6-236P-201ENST00000363886 106 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 GSTA8P-201ENST00000404253 637 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 OR51A3P-201ENST00000413596 924 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC004987.3-201ENST00000413879 771 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 LIPT1P1-201ENST00000415870 1186 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 USP9YP21-201ENST00000420603 432 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 VDAC1P6-201ENST00000430062 855 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 RPL7P31-201ENST00000450192 724 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 DDX39BP2-208ENST00000453923 258 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 DHFRP3-201ENST00000455595 559 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 RPL7AP28-201ENST00000464513 571 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 UQCRHP4-201ENST00000471686 272 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC090071.1-201ENST00000507713 644 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 RN7SKP21-201ENST00000516503 220 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 RNU6-1028P-201ENST00000517164 93 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 MRPL49P2-201ENST00000521066 465 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 HIGD1AP6-201ENST00000521833 279 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 RPL21P7-201ENST00000557463 483 ntBASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPIPA3F8WFD2 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms