Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 HMGB1P19-201ENST00000517578 577 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 HIGD1AP6-201ENST00000521833 279 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 MIR3667-201ENST00000581025 74 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC022069.1-201ENST00000582910 658 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 PIGPP4-201ENST00000584447 307 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC011477.5-201ENST00000586571 259 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 VN1R82P-201ENST00000601481 356 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AL390838.2-201ENST00000602394 274 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AL031320.1-201ENST00000604177 357 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC009220.3-201ENST00000604318 586 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC064807.4-201ENST00000607201 407 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 MIR8069-1-201ENST00000616627 86 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 LINC00901.1-201ENST00000617252 152 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC069209.1-201ENST00000619282 651 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AC087385.3-201ENST00000620477 187 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 MIR8069-2-201ENST00000621412 86 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK5RAP3Q96JB5 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AL442639.1-201ENST00000625030 1899 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC005539.1-201ENST00000443768 1479 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 MTND5P31-201ENST00000419366 1374 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 IL6STP1-201ENST00000346911 1020 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AL133264.1-201ENST00000407157 562 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 RNU2-42P-201ENST00000410697 113 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AL365203.2-201ENST00000423444 196 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC073648.4-201ENST00000442655 781 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 HMGB3P21-201ENST00000452483 547 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 LINC00888-204ENST00000487386 421 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 RPL32P9-201ENST00000487963 407 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 RPL30P11-201ENST00000495304 339 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AF279873.1-201ENST00000523393 313 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 FKBP1BP1-201ENST00000553366 325 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC002400.1-201ENST00000569310 726 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 OR1F2P-201ENST00000570470 933 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 MIR4512-201ENST00000583257 77 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC006539.2-201ENST00000601729 572 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC106791.2-201ENST00000604680 391 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AL359757.1-201ENST00000623176 255 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AC010608.2-201ENST00000624830 470 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 AL731566.1-201ENST00000620490 1937 ntBASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CDK5RAP3Q96JB5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.34□□□□□ -1.56
CDK5RAP3Q96JB5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.34□□□□□ -1.56
CDK5RAP3Q96JB5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CDK5RAP3Q96JB5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
CDK5RAP3Q96JB5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AL672167.1-205ENST00000641112 3080 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 OR56B2P-201ENST00000317102 954 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 RNA5SP191-201ENST00000362585 102 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 RNU6-582P-201ENST00000362989 107 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 RNU6-1066P-201ENST00000363573 105 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 Y_RNA.408-201ENST00000383987 102 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 RNU5A-2P-201ENST00000384337 116 ntBASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDK5RAP3Q96JB5 AL590084.2-201ENST00000401481 382 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms