Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXR1Q6PIV2 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXR1Q6PIV2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXR1Q6PIV2 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXR1Q6PIV2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXR1Q6PIV2 AC130360.2-201ENST00000533477 1556 ntBASIC6.52□□□□□ -1.37
FOXR1Q6PIV2 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXR1Q6PIV2 ZNF806-201ENST00000438300 1774 ntBASIC6.52□□□□□ -1.37
FOXR1Q6PIV2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
FOXR1Q6PIV2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXR1Q6PIV2 ASNSP3-201ENST00000451989 1306 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC024651.2-201ENST00000562480 2098 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 RNU6-238P-201ENST00000363313 106 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 Y_RNA.255-201ENST00000364581 97 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC117470.1-201ENST00000381974 330 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 MIR1-2-201ENST00000384961 85 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 UBBP1-201ENST00000392399 473 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 RPL12P23-201ENST00000405880 490 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 RN7SKP266-201ENST00000410232 287 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 RPL12P16-201ENST00000431098 498 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 RSU1P2-202ENST00000437884 485 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 RPL23AP28-201ENST00000448062 470 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 OR52I1-201ENST00000450052 1050 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC099340.1-201ENST00000475247 599 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AL035690.1-201ENST00000490892 383 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 RNA5SP441-201ENST00000516809 88 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC104986.1-201ENST00000517978 436 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 BNIP3P6-201ENST00000549284 499 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC090651.1-201ENST00000567865 634 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 HMGB1P6-201ENST00000569046 646 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC026898.1-201ENST00000586404 571 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AL590032.1-201ENST00000604920 252 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 RNU6-89P-201ENST00000606519 100 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 RNA5SP439-201ENST00000617595 124 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 AP001052.1-201ENST00000626421 99 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 PARP4P2-201ENST00000446672 3326 ntBASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXR1Q6PIV2 VPS35P1-201ENST00000563400 1518 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 CCT8P1-201ENST00000413611 1657 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 Y_RNA.5-201ENST00000362334 102 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 Y_RNA.135-201ENST00000363439 95 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 RNU6-169P-201ENST00000365336 107 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 Y_RNA.574-201ENST00000384766 95 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 MRPL42P2-201ENST00000403169 426 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 PRELID1P1-201ENST00000403549 660 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AL049697.2-201ENST00000403708 294 ntBASIC6.5□□□□□ -1.37
FOXR1Q6PIV2 AL359634.1-202ENST00000404721 284 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms