Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AC114546.3-201ENST00000623582 1734 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AL596244.1-201ENST00000567068 3779 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 SNORD37.1-201ENST00000390968 65 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AC005522.1-201ENST00000395416 346 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AL359694.1-201ENST00000403247 604 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AP000534.2-201ENST00000412729 568 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 RPL31P12-201ENST00000422587 358 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AHCYP8-201ENST00000425108 209 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AL121578.2-201ENST00000448797 447 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 SBDSP1-204ENST00000453858 737 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AC104308.1-201ENST00000454621 333 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 PPIAP21-201ENST00000464473 501 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 RPL5P30-201ENST00000465511 891 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 RN7SL70P-201ENST00000478322 302 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AC091849.1-201ENST00000509920 121 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 SCARNA6.1-201ENST00000516989 238 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 OR4T1P-201ENST00000554933 911 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 MT1CP-201ENST00000567054 174 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 RN7SL199P-201ENST00000578752 281 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 RN7SL656P-201ENST00000579044 281 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 RN7SL404P-201ENST00000582421 281 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AC007448.1-201ENST00000582714 234 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 AL390877.1-201ENST00000605704 214 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 MIR6503-201ENST00000622884 86 ntBASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AL049641.1-201ENST00000441055 1948 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 Y_RNA.80-201ENST00000362996 102 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 Y_RNA.117-201ENST00000363294 101 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 RNU6-289P-201ENST00000364093 107 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 RNU6-115P-201ENST00000364310 107 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 RNU6-99P-201ENST00000364721 107 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 Y_RNA.414-201ENST00000384011 101 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 UBBP1-201ENST00000392399 473 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AL353133.1-201ENST00000407695 401 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AL663061.1-201ENST00000416625 580 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 RBMY2KP-201ENST00000418221 992 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 SPATA20P1-201ENST00000423089 438 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC019097.1-201ENST00000424783 735 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 FABP7P2-201ENST00000429946 379 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AF228730.2-201ENST00000438784 848 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 RPL7P52-201ENST00000449200 742 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 MRPS31P2-201ENST00000451581 518 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 AC002553.2-201ENST00000453217 340 ntBASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.47□□□□□ -1.37
CUEDC1Q9NWM3 RPL7AP23-201ENST00000482625 776 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms