Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP1P23763 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP1P23763 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VAMP1P23763 AC010624.4-201ENST00000597606 1351 ntBASIC5.52□□□□□ -1.53
VAMP1P23763 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
VAMP1P23763 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.52□□□□□ -1.53
VAMP1P23763 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
VAMP1P23763 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP1P23763 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP1P23763 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP1P23763 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
VAMP1P23763 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP1P23763 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP1P23763 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP1P23763 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP1P23763 SAMMSON-226ENST00000642089 1582 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 MAPK10-338ENST00000641647 3362 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP1P23763 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP1P23763 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP1P23763 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP1P23763 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP1P23763 RNA5SP455-201ENST00000365190 119 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 RNU4-48P-201ENST00000365559 182 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VAMP1P23763 SNORA69-201ENST00000383895 132 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 RNU6-1181P-201ENST00000384191 106 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 TXNP7-201ENST00000406296 293 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 RNU2-36P-201ENST00000410361 191 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP1P23763 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP1P23763 RPS27P18-201ENST00000431701 247 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 HBBP1-201ENST00000433329 439 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 SUMO2P3-201ENST00000438311 288 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 TDGF1P1-201ENST00000445734 527 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP1P23763 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP1P23763 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 AC091982.1-202ENST00000473923 343 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 AC116562.3-201ENST00000506136 177 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP1P23763 AF186190.1-201ENST00000517470 480 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 AC068587.5-201ENST00000528506 175 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP1P23763 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP1P23763 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 FAM30C-201ENST00000561158 410 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
VAMP1P23763 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 RN7SL270P-201ENST00000579643 281 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC5.51□□□□□ -1.53
VAMP1P23763 RN7SL760P-201ENST00000607344 270 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 AC004067.1-201ENST00000608733 700 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 FAM27E3-202ENST00000614611 340 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.51□□□□□ -1.53
VAMP1P23763 RFPL4AP6-201ENST00000616792 846 ntBASIC5.51□□□□□ -1.53
VAMP1P23763 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
VAMP1P23763 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VAMP1P23763 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP1P23763 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP1P23763 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.51□□□□□ -1.53
VAMP1P23763 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP1P23763 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.51□□□□□ -1.53
VAMP1P23763 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP1P23763 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VAMP1P23763 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP1P23763 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VAMP1P23763 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP1P23763 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
VAMP1P23763 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.5□□□□□ -1.53
VAMP1P23763 MTCO1P11-201ENST00000429111 1528 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP1P23763 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP1P23763 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VAMP1P23763 Y_RNA.38-201ENST00000362617 102 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 RNU6-511P-201ENST00000363496 107 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 RNU6-1284P-201ENST00000363701 100 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 RNU1-55P-201ENST00000365510 158 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 Y_RNA.367-201ENST00000365544 101 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 RN7SKP81-201ENST00000365603 331 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.5□□□□□ -1.53
VAMP1P23763 SNORA51.7-201ENST00000384171 134 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 AL133260.1-201ENST00000405720 405 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 RPL7AP73-201ENST00000413490 353 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 GJA6P-201ENST00000415117 1042 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 OR51A5P-201ENST00000415429 942 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
VAMP1P23763 RPL30P16-201ENST00000419341 429 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 AC018804.1-201ENST00000430381 618 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.5□□□□□ -1.53
VAMP1P23763 GTF2IP20-201ENST00000431663 360 ntBASIC5.5□□□□□ -1.53
VAMP1P23763 MTCO3P45-201ENST00000443036 613 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms