Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM1O00151 TPMTP4-201ENST00000450749 678 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM1O00151 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM1O00151 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM1O00151 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM1O00151 AC023050.1-201ENST00000498198 304 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM1O00151 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM1O00151 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.01□□□□□ -1.77
PDLIM1O00151 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PDLIM1O00151 AP002812.4-201ENST00000532139 286 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM1O00151 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM1O00151 AC069061.3-201ENST00000582254 823 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM1O00151 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.01□□□□□ -1.77
PDLIM1O00151 AC005776.1-201ENST00000603164 290 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 MIR6748-201ENST00000610433 71 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 AL136295.6-201ENST00000610486 658 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 AL450489.1-201ENST00000612071 468 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM1O00151 AL133243.1-201ENST00000614487 366 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 AC095038.2-201ENST00000621464 1070 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 AC097372.4-201ENST00000625025 466 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 FP325313.1-201ENST00000638228 703 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM1O00151 RNF6P1-201ENST00000444889 1784 ntBASIC4.01□□□□□ -1.77
PDLIM1O00151 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM1O00151 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
PDLIM1O00151 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM1O00151 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.01□□□□□ -1.77
PDLIM1O00151 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDLIM1O00151 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM1O00151 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM1O00151 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 RNU1-32P-201ENST00000363937 159 ntBASIC4□□□□□ -1.77
PDLIM1O00151 RNU6-796P-201ENST00000391086 107 ntBASIC4□□□□□ -1.77
PDLIM1O00151 AC097374.1-203ENST00000400783 485 ntBASIC4□□□□□ -1.77
PDLIM1O00151 ATP5F1P6-201ENST00000402768 767 ntBASIC4□□□□□ -1.77
PDLIM1O00151 AL590290.1-201ENST00000405336 380 ntBASIC4□□□□□ -1.77
PDLIM1O00151 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 SNRPFP1-201ENST00000414761 252 ntBASIC4□□□□□ -1.77
PDLIM1O00151 AC023128.2-201ENST00000420880 1223 ntBASIC4□□□□□ -1.77
PDLIM1O00151 PNRC2P1-201ENST00000423940 420 ntBASIC4□□□□□ -1.77
PDLIM1O00151 VN1R42P-201ENST00000424651 344 ntBASIC4□□□□□ -1.77
PDLIM1O00151 CNOT7P1-201ENST00000429006 852 ntBASIC4□□□□□ -1.77
PDLIM1O00151 AC005189.1-201ENST00000431286 310 ntBASIC4□□□□□ -1.77
PDLIM1O00151 USP9YP31-201ENST00000431405 881 ntBASIC4□□□□□ -1.77
PDLIM1O00151 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4□□□□□ -1.77
PDLIM1O00151 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM1O00151 ARL2BPP10-201ENST00000446487 531 ntBASIC4□□□□□ -1.77
PDLIM1O00151 AC010307.1-201ENST00000467206 836 ntBASIC4□□□□□ -1.77
PDLIM1O00151 RPL35AP15-201ENST00000468042 339 ntBASIC4□□□□□ -1.77
PDLIM1O00151 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM1O00151 AC093720.1-201ENST00000505681 714 ntBASIC4□□□□□ -1.77
PDLIM1O00151 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4□□□□□ -1.77
PDLIM1O00151 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4□□□□□ -1.77
PDLIM1O00151 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM1O00151 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4□□□□□ -1.77
PDLIM1O00151 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4□□□□□ -1.77
PDLIM1O00151 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4□□□□□ -1.77
PDLIM1O00151 MIR4715-201ENST00000584117 79 ntBASIC4□□□□□ -1.77
PDLIM1O00151 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM1O00151 RPL12P25-202ENST00000598100 674 ntBASIC4□□□□□ -1.77
PDLIM1O00151 AC093765.1-201ENST00000603758 881 ntBASIC4□□□□□ -1.77
PDLIM1O00151 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM1O00151 RMST_8.1-201ENST00000610287 165 ntBASIC4□□□□□ -1.77
PDLIM1O00151 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4□□□□□ -1.77
PDLIM1O00151 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM1O00151 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4□□□□□ -1.77
PDLIM1O00151 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM1O00151 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM1O00151 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.99□□□□□ -1.77
PDLIM1O00151 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM1O00151 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.99□□□□□ -1.77
PDLIM1O00151 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PDLIM1O00151 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDLIM1O00151 RNU6-609P-201ENST00000365459 107 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PDLIM1O00151 OR6K3-202ENST00000368146 996 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 SNORA37-201ENST00000384504 129 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.99□□□□□ -1.77
PDLIM1O00151 RNU4-27P-201ENST00000410889 139 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 ELOCP19-201ENST00000411919 318 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 FAR2P2-201ENST00000413041 594 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 VTA1P1-201ENST00000414044 866 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 TCEA1P4-201ENST00000415066 844 ntBASIC3.99□□□□□ -1.77
PDLIM1O00151 MTND4P11-201ENST00000417020 1058 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms