Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 UBDP1-202ENST00000457888 382 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 AC006463.2-201ENST00000473326 348 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 HMGN1P10-201ENST00000474557 553 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 RPL7P38-201ENST00000488396 739 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.78□□□□□ -1.48
DDX1Q92499 AC025674.1-201ENST00000507074 324 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.78□□□□□ -1.48
DDX1Q92499 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DDX1Q92499 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.78□□□□□ -1.48
DDX1Q92499 RNU6-718P-201ENST00000516166 105 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 RN7SKP96-201ENST00000516948 297 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 SNORA48.10-201ENST00000516965 160 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.78□□□□□ -1.48
DDX1Q92499 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.78□□□□□ -1.48
DDX1Q92499 AC027309.2-201ENST00000520566 192 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
DDX1Q92499 AC127024.5-201ENST00000580085 462 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 MIR4697-201ENST00000582977 78 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 AC008507.1-201ENST00000587506 734 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DDX1Q92499 AL445222.1-201ENST00000607259 628 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 AC092650.2-201ENST00000619984 902 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 PCMTD1P7-201ENST00000634506 357 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
DDX1Q92499 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DDX1Q92499 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
DDX1Q92499 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DDX1Q92499 AL353796.1-201ENST00000561542 3241 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
DDX1Q92499 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
DDX1Q92499 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
DDX1Q92499 NLRP3P1-201ENST00000622303 1785 ntBASIC5.78□□□□□ -1.48
DDX1Q92499 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DDX1Q92499 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
DDX1Q92499 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.77□□□□□ -1.49
DDX1Q92499 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.77□□□□□ -1.49
DDX1Q92499 AP001029.2-203ENST00000589795 4910 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 AC125336.1-201ENST00000508893 2827 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 AC008033.1-201ENST00000216407 1162 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
DDX1Q92499 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
DDX1Q92499 SNORA72.1-201ENST00000363485 129 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 RNU4-2-201ENST00000365668 141 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 AL356967.1-201ENST00000406305 431 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 AC068533.2-201ENST00000411872 306 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.77□□□□□ -1.49
DDX1Q92499 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.77□□□□□ -1.49
DDX1Q92499 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.77□□□□□ -1.49
DDX1Q92499 AC062016.2-201ENST00000420950 676 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.77□□□□□ -1.49
DDX1Q92499 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.77□□□□□ -1.49
DDX1Q92499 MTCO2P11-201ENST00000431069 680 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 USP12PX-201ENST00000432383 1057 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.77□□□□□ -1.49
DDX1Q92499 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.77□□□□□ -1.49
DDX1Q92499 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.77□□□□□ -1.49
DDX1Q92499 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.77□□□□□ -1.49
DDX1Q92499 AC112653.1-201ENST00000443851 386 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.77□□□□□ -1.49
DDX1Q92499 NPM1P39-201ENST00000449818 867 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 AC008953.1-201ENST00000497334 318 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 MTND5P5-201ENST00000503764 376 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 HMGB1P44-201ENST00000508597 572 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 AC098799.2-201ENST00000509466 868 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 MTND6P2-201ENST00000512226 524 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 HMGN1P9-201ENST00000515212 298 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.77□□□□□ -1.49
DDX1Q92499 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.77□□□□□ -1.49
DDX1Q92499 NPM1P6-201ENST00000521088 871 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 AP005639.2-201ENST00000527592 928 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.77□□□□□ -1.49
DDX1Q92499 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.77□□□□□ -1.49
DDX1Q92499 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.77□□□□□ -1.49
DDX1Q92499 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.77□□□□□ -1.49
DDX1Q92499 ZNF519P2-201ENST00000557032 169 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.77□□□□□ -1.49
DDX1Q92499 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.77□□□□□ -1.49
DDX1Q92499 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
DDX1Q92499 AC087763.1-201ENST00000603391 286 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.77□□□□□ -1.49
DDX1Q92499 MTND1P37-201ENST00000636562 264 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
DDX1Q92499 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.77□□□□□ -1.49
DDX1Q92499 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.77□□□□□ -1.49
DDX1Q92499 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DDX1Q92499 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms