Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC011005.3-201ENST00000491624 395 ntBASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AP000790.1-201ENST00000528891 737 ntBASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 ZNF705CP-201ENST00000530515 889 ntBASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AP001180.3-201ENST00000582221 145 ntBASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 SNORD39.3-201ENST00000584451 71 ntBASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AC098935.2-201ENST00000604222 466 ntBASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AC010680.4-201ENST00000605334 543 ntBASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 MIR6853-201ENST00000619642 74 ntBASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AL442639.1-201ENST00000625030 1899 ntBASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
LRRTM4Q86VH4 AC107068.1-201ENST00000563286 4218 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 MAPK10-349ENST00000641767 3661 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 RNU6-1226P-201ENST00000384317 107 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 SNORA70E-201ENST00000384492 135 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 MIR298-201ENST00000401212 88 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 RPL37P18-201ENST00000411602 243 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AL133384.1-201ENST00000412744 351 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 RPL31P2-201ENST00000413849 377 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 ELOCP9-201ENST00000418624 239 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AL645608.4-201ENST00000423619 154 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 SDCBPP2-201ENST00000424643 885 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC016831.4-201ENST00000438302 307 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 RPL23AP16-201ENST00000441715 421 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 TRBV26-201ENST00000456572 344 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC013828.1-201ENST00000481845 158 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC091868.1-201ENST00000508746 304 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC008837.2-201ENST00000513076 418 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 RNU6-1261P-201ENST00000517194 104 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC023050.2-201ENST00000544968 387 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC069366.1-201ENST00000583159 838 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AL161616.1-201ENST00000611867 286 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC107075.1-201ENST00000613695 314 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 MIR6715B-201ENST00000637172 77 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 AC091046.3-201ENST00000631455 1574 ntBASIC4.7□□□□□ -1.66
LRRTM4Q86VH4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.69□□□□□ -1.66
LRRTM4Q86VH4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRRTM4Q86VH4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LRRTM4Q86VH4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRTM4Q86VH4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRRTM4Q86VH4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
LRRTM4Q86VH4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRTM4Q86VH4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LRRTM4Q86VH4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms