Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LHX1P48742 OR11H4-201ENST00000315409 1082 ntBASIC4.42□□□□□ -1.7
LHX1P48742 IL6STP1-201ENST00000346911 1020 ntBASIC4.42□□□□□ -1.7
LHX1P48742 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.42□□□□□ -1.7
LHX1P48742 RNU5B-4P-201ENST00000363508 111 ntBASIC4.42□□□□□ -1.7
LHX1P48742 OR52E6-202ENST00000379946 954 ntBASIC4.42□□□□□ -1.7
LHX1P48742 U6.112-201ENST00000384129 70 ntBASIC4.42□□□□□ -1.7
LHX1P48742 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LHX1P48742 DNAJC19P6-201ENST00000401853 280 ntBASIC4.42□□□□□ -1.7
LHX1P48742 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX1P48742 RN7SKP199-201ENST00000410325 305 ntBASIC4.42□□□□□ -1.7
LHX1P48742 CYCSP10-201ENST00000417973 294 ntBASIC4.42□□□□□ -1.7
LHX1P48742 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX1P48742 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX1P48742 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.42□□□□□ -1.7
LHX1P48742 AC115285.1-201ENST00000424879 736 ntBASIC4.42□□□□□ -1.7
LHX1P48742 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.42□□□□□ -1.7
LHX1P48742 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AL353597.2-202ENST00000434901 373 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX1P48742 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX1P48742 RPL5P32-201ENST00000454085 879 ntBASIC4.42□□□□□ -1.7
LHX1P48742 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC008280.2-201ENST00000455473 307 ntBASIC4.42□□□□□ -1.7
LHX1P48742 RPL38P1-201ENST00000460914 211 ntBASIC4.42□□□□□ -1.7
LHX1P48742 RPL7P1-201ENST00000468161 747 ntBASIC4.42□□□□□ -1.7
LHX1P48742 RPL7P9-201ENST00000468715 747 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC006511.1-201ENST00000470614 315 ntBASIC4.42□□□□□ -1.7
LHX1P48742 RPL23AP71-201ENST00000470966 469 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AL035404.1-201ENST00000497982 568 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC093801.2-201ENST00000503966 1050 ntBASIC4.42□□□□□ -1.7
LHX1P48742 HPRT1P2-201ENST00000505250 544 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC021146.3-201ENST00000511911 260 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC010374.2-201ENST00000512933 535 ntBASIC4.42□□□□□ -1.7
LHX1P48742 MTATP6P9-201ENST00000515039 680 ntBASIC4.42□□□□□ -1.7
LHX1P48742 HMGB1P23-201ENST00000518743 568 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC134698.5-201ENST00000519444 336 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.42□□□□□ -1.7
LHX1P48742 AC107918.3-201ENST00000533272 382 ntBASIC4.42□□□□□ -1.7
LHX1P48742 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.42□□□□□ -1.7
LHX1P48742 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.42□□□□□ -1.7
LHX1P48742 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX1P48742 DYNLL1P4-201ENST00000549314 266 ntBASIC4.42□□□□□ -1.7
LHX1P48742 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.42□□□□□ -1.7
LHX1P48742 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX1P48742 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX1P48742 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX1P48742 MTND4LP24-201ENST00000572277 291 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC011492.1-201ENST00000600023 315 ntBASIC4.42□□□□□ -1.7
LHX1P48742 BNIP3P39-201ENST00000601077 554 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX1P48742 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
LHX1P48742 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.42□□□□□ -1.7
LHX1P48742 AC009704.2-201ENST00000618739 483 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC015908.5-201ENST00000623289 343 ntBASIC4.42□□□□□ -1.7
LHX1P48742 CR392039.4-201ENST00000624968 501 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AC126544.2-201ENST00000625174 749 ntBASIC4.42□□□□□ -1.7
LHX1P48742 RNA5SP196-201ENST00000625967 102 ntBASIC4.42□□□□□ -1.7
LHX1P48742 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.42□□□□□ -1.7
LHX1P48742 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LHX1P48742 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LHX1P48742 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX1P48742 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LHX1P48742 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX1P48742 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX1P48742 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.42□□□□□ -1.7
LHX1P48742 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX1P48742 NEAT1-202ENST00000501122 22743 ntBASIC4.42□□□□□ -1.7
LHX1P48742 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX1P48742 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 RNU6-1339P-201ENST00000363574 91 ntBASIC4.41□□□□□ -1.7
LHX1P48742 RNA5SP130-201ENST00000364431 114 ntBASIC4.41□□□□□ -1.7
LHX1P48742 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX1P48742 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 SNORD65C-201ENST00000390962 71 ntBASIC4.41□□□□□ -1.7
LHX1P48742 RNU11-4P-201ENST00000391149 133 ntBASIC4.41□□□□□ -1.7
LHX1P48742 MTATP6P31-201ENST00000406985 692 ntBASIC4.41□□□□□ -1.7
LHX1P48742 RN7SKP263-201ENST00000411194 309 ntBASIC4.41□□□□□ -1.7
LHX1P48742 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.41□□□□□ -1.7
LHX1P48742 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 AC234782.4-201ENST00000417646 1048 ntBASIC4.41□□□□□ -1.7
LHX1P48742 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 AC246680.2-201ENST00000422106 389 ntBASIC4.41□□□□□ -1.7
LHX1P48742 AC013410.2-201ENST00000422627 201 ntBASIC4.41□□□□□ -1.7
LHX1P48742 YWHAEP5-201ENST00000431545 765 ntBASIC4.41□□□□□ -1.7
LHX1P48742 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX1P48742 OR4C10P-201ENST00000434991 931 ntBASIC4.41□□□□□ -1.7
LHX1P48742 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.41□□□□□ -1.7
LHX1P48742 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX1P48742 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.41□□□□□ -1.7
LHX1P48742 RPS7P5-201ENST00000441482 581 ntBASIC4.41□□□□□ -1.7
LHX1P48742 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LHX1P48742 YWHAQP9-201ENST00000445891 512 ntBASIC4.41□□□□□ -1.7
LHX1P48742 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.41□□□□□ -1.7
LHX1P48742 RAD23BP3-201ENST00000454157 1152 ntBASIC4.41□□□□□ -1.7
LHX1P48742 RPL36AP13-201ENST00000457490 317 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms