Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CD44P16070 AC009237.3-203ENST00000442128 3551 ntBASIC8.15□□□□□ -1.11
CD44P16070 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
CD44P16070 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.14□□□□□ -1.11
CD44P16070 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.14□□□□□ -1.11
CD44P16070 MARK2P4-201ENST00000503381 2380 ntBASIC8.14□□□□□ -1.11
CD44P16070 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.14□□□□□ -1.11
CD44P16070 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.14□□□□□ -1.11
CD44P16070 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.14□□□□□ -1.11
CD44P16070 COX6B1P3-201ENST00000312310 260 ntBASIC8.14□□□□□ -1.11
CD44P16070 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 MIR181C-201ENST00000384881 110 ntBASIC8.14□□□□□ -1.11
CD44P16070 RNU6-1275P-201ENST00000391087 107 ntBASIC8.14□□□□□ -1.11
CD44P16070 PDCL3P5-201ENST00000398028 722 ntBASIC8.14□□□□□ -1.11
CD44P16070 RN7SKP268-201ENST00000411107 316 ntBASIC8.14□□□□□ -1.11
CD44P16070 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC8.14□□□□□ -1.11
CD44P16070 EBAG9P1-201ENST00000418955 543 ntBASIC8.14□□□□□ -1.11
CD44P16070 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC8.14□□□□□ -1.11
CD44P16070 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC8.14□□□□□ -1.11
CD44P16070 HMGN3P1-201ENST00000453847 193 ntBASIC8.14□□□□□ -1.11
CD44P16070 AL445433.1-201ENST00000457507 257 ntBASIC8.14□□□□□ -1.11
CD44P16070 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC8.14□□□□□ -1.11
CD44P16070 snoU13.8-201ENST00000458890 104 ntBASIC8.14□□□□□ -1.11
CD44P16070 RNU7-138P-201ENST00000459479 64 ntBASIC8.14□□□□□ -1.11
CD44P16070 AC022730.2-201ENST00000465359 452 ntBASIC8.14□□□□□ -1.11
CD44P16070 RPL23AP71-201ENST00000470966 469 ntBASIC8.14□□□□□ -1.11
CD44P16070 AC066616.1-201ENST00000486795 413 ntBASIC8.14□□□□□ -1.11
CD44P16070 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CD44P16070 AC055733.3-201ENST00000505214 523 ntBASIC8.14□□□□□ -1.11
CD44P16070 AC109481.1-201ENST00000509173 282 ntBASIC8.14□□□□□ -1.11
CD44P16070 CDH12P4-201ENST00000517835 295 ntBASIC8.14□□□□□ -1.11
CD44P16070 CDH12P3-201ENST00000517935 295 ntBASIC8.14□□□□□ -1.11
CD44P16070 CDH12P1-201ENST00000518435 295 ntBASIC8.14□□□□□ -1.11
CD44P16070 COX6B1P6-201ENST00000522347 255 ntBASIC8.14□□□□□ -1.11
CD44P16070 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.14□□□□□ -1.11
CD44P16070 NUTF2P2-201ENST00000551207 384 ntBASIC8.14□□□□□ -1.11
CD44P16070 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC8.14□□□□□ -1.11
CD44P16070 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.14□□□□□ -1.11
CD44P16070 AC005951.2-201ENST00000576282 495 ntBASIC8.14□□□□□ -1.11
CD44P16070 AC129915.3-201ENST00000634128 948 ntBASIC8.14□□□□□ -1.11
CD44P16070 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 AC034111.1-201ENST00000562143 3770 ntBASIC8.14□□□□□ -1.11
CD44P16070 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC8.14□□□□□ -1.11
CD44P16070 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CD44P16070 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.14□□□□□ -1.11
CD44P16070 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
CD44P16070 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.13□□□□□ -1.11
CD44P16070 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CD44P16070 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CD44P16070 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 MSRB1P1-201ENST00000396851 354 ntBASIC8.13□□□□□ -1.11
CD44P16070 PTMAP8-201ENST00000397729 342 ntBASIC8.13□□□□□ -1.11
CD44P16070 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 RPS4XP7-201ENST00000406274 780 ntBASIC8.13□□□□□ -1.11
CD44P16070 AC011742.1-201ENST00000431448 434 ntBASIC8.13□□□□□ -1.11
CD44P16070 AL159987.2-201ENST00000432754 307 ntBASIC8.13□□□□□ -1.11
CD44P16070 AL353803.3-201ENST00000444641 335 ntBASIC8.13□□□□□ -1.11
CD44P16070 AC005229.2-201ENST00000456995 399 ntBASIC8.13□□□□□ -1.11
CD44P16070 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 AC021074.2-201ENST00000468434 172 ntBASIC8.13□□□□□ -1.11
CD44P16070 AC091982.1-202ENST00000473923 343 ntBASIC8.13□□□□□ -1.11
CD44P16070 RPL23AP65-201ENST00000475608 468 ntBASIC8.13□□□□□ -1.11
CD44P16070 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 AC146944.3-201ENST00000509969 371 ntBASIC8.13□□□□□ -1.11
CD44P16070 AC023794.3-204ENST00000510754 236 ntBASIC8.13□□□□□ -1.11
CD44P16070 RNU6-659P-201ENST00000516454 104 ntBASIC8.13□□□□□ -1.11
CD44P16070 RNU6-1092P-201ENST00000516955 87 ntBASIC8.13□□□□□ -1.11
CD44P16070 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC8.13□□□□□ -1.11
CD44P16070 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 TUBAP4-201ENST00000569261 416 ntBASIC8.13□□□□□ -1.11
CD44P16070 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC8.13□□□□□ -1.11
CD44P16070 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC8.13□□□□□ -1.11
CD44P16070 OR5AH1P-201ENST00000595968 283 ntBASIC8.13□□□□□ -1.11
CD44P16070 AC037487.3-201ENST00000606668 112 ntBASIC8.13□□□□□ -1.11
CD44P16070 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 DLD-214ENST00000639772 421 ntTSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms