Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC128713.1-201ENST00000471495 306 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 AC116562.3-201ENST00000506136 177 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 RNU6-388P-201ENST00000517012 105 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 RNU6-389P-201ENST00000517048 105 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 AC068587.5-201ENST00000528506 175 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC7.09□□□□□ -1.27
HOXA2O43364 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.09□□□□□ -1.27
HOXA2O43364 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.09□□□□□ -1.27
HOXA2O43364 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.09□□□□□ -1.27
HOXA2O43364 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC7.09□□□□□ -1.27
HOXA2O43364 AP005119.1-201ENST00000580956 292 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 AC060771.1-201ENST00000582031 164 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.09□□□□□ -1.27
HOXA2O43364 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.09□□□□□ -1.27
HOXA2O43364 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
HOXA2O43364 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXA2O43364 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.09□□□□□ -1.27
HOXA2O43364 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 AC134882.1-201ENST00000603738 1676 ntBASIC7.09□□□□□ -1.27
HOXA2O43364 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HOXA2O43364 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
HOXA2O43364 NBPF8-201ENST00000583271 5330 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
HOXA2O43364 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
HOXA2O43364 AKAP17BP-201ENST00000431706 2719 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC7.08□□□□□ -1.28
HOXA2O43364 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.08□□□□□ -1.28
HOXA2O43364 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.08□□□□□ -1.28
HOXA2O43364 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 MAPK10-377ENST00000642006 2752 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.08□□□□□ -1.28
HOXA2O43364 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 RNU6-1029P-201ENST00000384109 107 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 U3.20-201ENST00000390909 217 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 SOD2P1-201ENST00000396543 562 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXA2O43364 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXA2O43364 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 RPL5P30-201ENST00000465511 891 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.08□□□□□ -1.28
HOXA2O43364 AC110794.1-201ENST00000505816 425 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXA2O43364 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXA2O43364 AC002456.2-201ENST00000509356 380 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 RNU6-256P-201ENST00000516747 97 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXA2O43364 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.08□□□□□ -1.28
HOXA2O43364 AL133399.1-201ENST00000527476 298 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AC027544.3-201ENST00000535082 757 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.08□□□□□ -1.28
HOXA2O43364 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
HOXA2O43364 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXA2O43364 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXA2O43364 MIR4703-201ENST00000577728 79 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC7.08□□□□□ -1.28
HOXA2O43364 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.08□□□□□ -1.28
HOXA2O43364 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.08□□□□□ -1.28
HOXA2O43364 AC007485.1-201ENST00000616755 206 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AC098657.3-201ENST00000620434 263 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AC131009.3-201ENST00000621809 287 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AC120057.5-201ENST00000623840 154 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 PNPT1P2-201ENST00000456768 2050 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AC097714.1-201ENST00000511272 1647 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 AC011460.1-201ENST00000636268 1834 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AC107081.3-201ENST00000612715 2034 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.08□□□□□ -1.28
HOXA2O43364 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
HOXA2O43364 SPATA31C2-201ENST00000324915 3777 ntBASIC7.08□□□□□ -1.28
HOXA2O43364 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.08□□□□□ -1.28
HOXA2O43364 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.08□□□□□ -1.28
HOXA2O43364 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HOXA2O43364 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
HOXA2O43364 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HOXA2O43364 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HOXA2O43364 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.07□□□□□ -1.28
HOXA2O43364 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.07□□□□□ -1.28
HOXA2O43364 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.07□□□□□ -1.28
HOXA2O43364 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HOXA2O43364 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC7.07□□□□□ -1.28
HOXA2O43364 AL034417.4-202ENST00000642135 2236 ntBASIC7.07□□□□□ -1.28
HOXA2O43364 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.07□□□□□ -1.28
HOXA2O43364 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms