Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX6Q9UPM6 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 RBBP8P1-201ENST00000449447 1844 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 XRCC6P2-201ENST00000457831 1822 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 LRRC37A11P-202ENST00000579258 3717 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 Y_RNA.586-201ENST00000391146 98 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AC093106.2-201ENST00000428212 385 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AC007389.2-201ENST00000434630 306 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AC005040.1-201ENST00000437783 482 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 RNU7-138P-201ENST00000459479 64 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 RN7SL325P-201ENST00000460434 283 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 RN7SL152P-201ENST00000484176 298 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 RNU6-844P-201ENST00000517175 102 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 RPL23AP84-201ENST00000571193 464 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AC005520.5-201ENST00000613926 164 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 MIR6849-201ENST00000618543 69 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AC012629.3-201ENST00000623397 328 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 RLIMP1-201ENST00000339626 1680 ntBASIC7.06□□□□□ -1.28
LHX6Q9UPM6 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX6Q9UPM6 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 AC104837.1-201ENST00000444644 1587 ntBASIC7.05□□□□□ -1.28
LHX6Q9UPM6 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
LHX6Q9UPM6 AC138393.1-203ENST00000327086 343 ntBASIC7.05□□□□□ -1.28
LHX6Q9UPM6 RNU6-1255P-201ENST00000363434 112 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms