Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 MIR4319-201ENST00000577285 85 ntBASIC3.58□□□□□ -1.84
CHD7Q9P2D1 AP003485.2-201ENST00000623636 610 ntBASIC3.58□□□□□ -1.84
CHD7Q9P2D1 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHD7Q9P2D1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.58□□□□□ -1.84
CHD7Q9P2D1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 S100A11P1-201ENST00000477525 312 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AP006245.1-201ENST00000522549 120 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 DDX6P1-205ENST00000441966 1436 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AL645568.2-201ENST00000432815 1337 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 RN7SL863P-201ENST00000462370 296 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC103783.1-201ENST00000520506 373 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC027309.2-201ENST00000520566 192 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 MIR2682-201ENST00000580305 110 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC002069.2-201ENST00000603580 883 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AL135938.1-201ENST00000443141 297 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC021678.1-201ENST00000505195 936 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC004024.1-201ENST00000549244 247 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 MIR4769-201ENST00000584126 77 ntBASIC3.57□□□□□ -1.84
CHD7Q9P2D1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC3.57□□□□□ -1.84
CHD7Q9P2D1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 AL109933.2-201ENST00000452651 260 ntBASIC3.56□□□□□ -1.84
CHD7Q9P2D1 HIGD1AP3-201ENST00000515857 278 ntBASIC3.56□□□□□ -1.84
CHD7Q9P2D1 GTF3AP2-201ENST00000557014 266 ntBASIC3.56□□□□□ -1.84
CHD7Q9P2D1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 OR2AS2P-201ENST00000606902 342 ntBASIC3.56□□□□□ -1.84
CHD7Q9P2D1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 RNA5SP42-201ENST00000364278 115 ntBASIC3.56□□□□□ -1.84
CHD7Q9P2D1 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 RPS4XP8-201ENST00000402039 771 ntBASIC3.56□□□□□ -1.84
CHD7Q9P2D1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 RN7SL432P-201ENST00000484057 298 ntBASIC3.56□□□□□ -1.84
CHD7Q9P2D1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 KLKP1-201ENST00000595979 403 ntBASIC3.56□□□□□ -1.84
CHD7Q9P2D1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 Z95331.1-201ENST00000623075 23112 ntBASIC3.56□□□□□ -1.84
CHD7Q9P2D1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD7Q9P2D1 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 AC099563.1-201ENST00000456086 418 ntBASIC3.55□□□□□ -1.84
CHD7Q9P2D1 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 AC026333.2-201ENST00000542164 106 ntBASIC3.55□□□□□ -1.84
CHD7Q9P2D1 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD7Q9P2D1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms