Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HIGD1AP6-201ENST00000521833 279 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN2P57739 AC004217.3-201ENST00000551552 878 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 MTND3P12-201ENST00000559068 328 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.53□□□□□ -1.68
CLDN2P57739 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN2P57739 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN2P57739 MRPS35P3-201ENST00000603189 709 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN2P57739 AC091488.1-201ENST00000604239 660 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 AP003973.1-201ENST00000604639 691 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 AP000255.1-201ENST00000610276 676 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 AC123768.4-201ENST00000616244 701 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 AC107068.1-201ENST00000563286 4218 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLDN2P57739 DBF4P1-201ENST00000412976 1892 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
CLDN2P57739 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLDN2P57739 AC135352.1-201ENST00000506173 1418 ntBASIC4.53□□□□□ -1.68
CLDN2P57739 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN2P57739 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN2P57739 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN2P57739 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN2P57739 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN2P57739 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN2P57739 AC000374.1-201ENST00000434698 1745 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN2P57739 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN2P57739 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN2P57739 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CLDN2P57739 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN2P57739 SNORD116.1-201ENST00000365628 92 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN2P57739 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN2P57739 RNU6-1151P-201ENST00000384684 107 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN2P57739 TMSB10P2-201ENST00000416049 131 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 TMBIM7P-201ENST00000418074 855 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 PAICSP7-201ENST00000419829 962 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AL356387.2-201ENST00000422272 243 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 OR2AH1P-201ENST00000425717 928 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN2P57739 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN2P57739 PPIAP17-201ENST00000438507 471 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN2P57739 GTF3AP5-201ENST00000442645 697 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AL672167.3-201ENST00000465951 960 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.52□□□□□ -1.69
CLDN2P57739 AC109327.1-201ENST00000471666 403 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN2P57739 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN2P57739 HMGB3P16-201ENST00000508037 287 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 RNA5SP135-201ENST00000517019 125 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN2P57739 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CLDN2P57739 MRPS36P5-201ENST00000551909 298 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.52□□□□□ -1.69
CLDN2P57739 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.52□□□□□ -1.69
CLDN2P57739 AC010487.1-201ENST00000594408 1172 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 VN1R78P-201ENST00000597393 564 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AC090948.1-201ENST00000607464 549 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AC022509.4-201ENST00000621404 572 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AC138965.3-201ENST00000623875 498 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AC079416.3-201ENST00000624479 549 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 AC019226.2-201ENST00000625973 424 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN2P57739 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN2P57739 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN2P57739 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CLDN2P57739 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN2P57739 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN2P57739 AL022322.2-201ENST00000624072 20397 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 SALL4P2-201ENST00000423288 2910 ntBASIC4.52□□□□□ -1.69
CLDN2P57739 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN2P57739 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLDN2P57739 AC026951.1-201ENST00000559530 2459 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AC010266.2-201ENST00000564741 3255 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN2P57739 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN2P57739 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN2P57739 RNU6-839P-201ENST00000363347 108 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 RNU6-560P-201ENST00000364007 108 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
CLDN2P57739 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN2P57739 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CLDN2P57739 AL049545.1-201ENST00000401856 572 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AL080315.1-201ENST00000406055 466 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 SNRPFP1-201ENST00000414761 252 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN2P57739 CKS1BP6-201ENST00000424932 240 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN2P57739 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN2P57739 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN2P57739 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN2P57739 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN2P57739 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN2P57739 AC104306.1-201ENST00000449702 371 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 ISCUP1-201ENST00000454451 448 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms