Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC119744.1-201ENST00000454746 1715 ntBASIC6.24□□□□□ -1.41
SMARCA4P51532 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMARCA4P51532 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMARCA4P51532 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SMARCA4P51532 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
SMARCA4P51532 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.24□□□□□ -1.41
SMARCA4P51532 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.24□□□□□ -1.41
SMARCA4P51532 NPM1P39-201ENST00000449818 867 ntBASIC6.24□□□□□ -1.41
SMARCA4P51532 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SMARCA4P51532 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.24□□□□□ -1.41
SMARCA4P51532 AL121594.4-201ENST00000556211 1196 ntBASIC6.24□□□□□ -1.41
SMARCA4P51532 AC034105.3-201ENST00000565294 442 ntBASIC6.24□□□□□ -1.41
SMARCA4P51532 MRPS35P3-201ENST00000603189 709 ntBASIC6.24□□□□□ -1.41
SMARCA4P51532 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMARCA4P51532 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA4P51532 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
SMARCA4P51532 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC6.23□□□□□ -1.41
SMARCA4P51532 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SMARCA4P51532 ANKRD36P1-201ENST00000344424 659 ntBASIC6.23□□□□□ -1.41
SMARCA4P51532 RNA5SP432-201ENST00000362480 116 ntBASIC6.23□□□□□ -1.41
SMARCA4P51532 SNORA80A-201ENST00000363922 136 ntBASIC6.23□□□□□ -1.41
SMARCA4P51532 AL603766.1-201ENST00000407763 664 ntBASIC6.23□□□□□ -1.41
SMARCA4P51532 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.23□□□□□ -1.41
SMARCA4P51532 MOB1AP1-201ENST00000430903 535 ntBASIC6.23□□□□□ -1.41
SMARCA4P51532 RPL12P46-201ENST00000436610 195 ntBASIC6.23□□□□□ -1.41
SMARCA4P51532 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC6.23□□□□□ -1.41
SMARCA4P51532 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.23□□□□□ -1.41
SMARCA4P51532 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.23□□□□□ -1.41
SMARCA4P51532 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC6.23□□□□□ -1.41
SMARCA4P51532 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA4P51532 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA4P51532 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMARCA4P51532 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SMARCA4P51532 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SMARCA4P51532 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA4P51532 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
SMARCA4P51532 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA4P51532 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA4P51532 ZNF807-201ENST00000328088 1707 ntBASIC6.22□□□□□ -1.41
SMARCA4P51532 RPL21P8-201ENST00000465083 535 ntBASIC6.22□□□□□ -1.41
SMARCA4P51532 RN7SL594P-201ENST00000470590 287 ntBASIC6.22□□□□□ -1.41
SMARCA4P51532 RNU4ATAC17P-201ENST00000517272 120 ntBASIC6.22□□□□□ -1.41
SMARCA4P51532 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.22□□□□□ -1.41
SMARCA4P51532 KLKP1-201ENST00000595979 403 ntBASIC6.22□□□□□ -1.41
SMARCA4P51532 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC6.22□□□□□ -1.41
SMARCA4P51532 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC6.22□□□□□ -1.41
SMARCA4P51532 AC007656.2-201ENST00000624902 4547 ntBASIC6.22□□□□□ -1.41
SMARCA4P51532 Z83843.1-201ENST00000604070 3685 ntBASIC6.22□□□□□ -1.41
SMARCA4P51532 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA4P51532 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA4P51532 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMARCA4P51532 RNA5SP42-201ENST00000364278 115 ntBASIC6.21□□□□□ -1.41
SMARCA4P51532 RNU1-140P-201ENST00000365040 165 ntBASIC6.21□□□□□ -1.41
SMARCA4P51532 RSL24D1P1-201ENST00000404972 493 ntBASIC6.21□□□□□ -1.41
SMARCA4P51532 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.21□□□□□ -1.41
SMARCA4P51532 CCRL1P1-201ENST00000449542 1053 ntBASIC6.21□□□□□ -1.41
SMARCA4P51532 RPS4XP2-201ENST00000458402 793 ntBASIC6.21□□□□□ -1.41
SMARCA4P51532 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC6.21□□□□□ -1.41
SMARCA4P51532 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.21□□□□□ -1.41
SMARCA4P51532 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
SMARCA4P51532 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.21□□□□□ -1.41
SMARCA4P51532 AL162274.2-201ENST00000614406 332 ntBASIC6.21□□□□□ -1.41
SMARCA4P51532 AL713922.2-201ENST00000619384 716 ntBASIC6.21□□□□□ -1.41
SMARCA4P51532 AC110801.1-201ENST00000623590 212 ntBASIC6.21□□□□□ -1.41
SMARCA4P51532 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SMARCA4P51532 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SMARCA4P51532 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SMARCA4P51532 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SMARCA4P51532 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SMARCA4P51532 RNU1-18P-201ENST00000363062 164 ntBASIC6.21□□□□□ -1.42
SMARCA4P51532 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SMARCA4P51532 AC107083.1-201ENST00000439643 279 ntBASIC6.21□□□□□ -1.42
SMARCA4P51532 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.21□□□□□ -1.42
SMARCA4P51532 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.21□□□□□ -1.42
SMARCA4P51532 AC092747.2-201ENST00000545069 983 ntBASIC6.21□□□□□ -1.42
SMARCA4P51532 CR383656.14-201ENST00000551951 406 ntBASIC6.21□□□□□ -1.42
SMARCA4P51532 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.21□□□□□ -1.42
SMARCA4P51532 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SMARCA4P51532 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SMARCA4P51532 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC6.2□□□□□ -1.42
SMARCA4P51532 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SMARCA4P51532 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
SMARCA4P51532 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SMARCA4P51532 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SMARCA4P51532 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SMARCA4P51532 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.2□□□□□ -1.42
SMARCA4P51532 AL353705.1-201ENST00000433468 480 ntBASIC6.2□□□□□ -1.42
SMARCA4P51532 RPS27AP1-201ENST00000475545 471 ntBASIC6.2□□□□□ -1.42
SMARCA4P51532 AC004069.2-201ENST00000505438 1114 ntBASIC6.2□□□□□ -1.42
SMARCA4P51532 RNU6-513P-201ENST00000516104 104 ntBASIC6.2□□□□□ -1.42
SMARCA4P51532 AC092868.3-201ENST00000560515 784 ntBASIC6.2□□□□□ -1.42
SMARCA4P51532 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.2□□□□□ -1.42
SMARCA4P51532 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SMARCA4P51532 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SMARCA4P51532 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMARCA4P51532 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SMARCA4P51532 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SMARCA4P51532 AL158071.1-201ENST00000430315 461 ntBASIC6.19□□□□□ -1.42
SMARCA4P51532 RPL7P28-201ENST00000437739 740 ntBASIC6.19□□□□□ -1.42
SMARCA4P51532 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms