Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNU6-478P-201ENST00000363904 110 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 Y_RNA.410-201ENST00000383992 113 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 MIR1290-201ENST00000408735 78 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 MIR1273A-201ENST00000408826 103 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 RNU6-380P-201ENST00000410207 107 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AC114489.1-201ENST00000421619 395 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AC245452.4-201ENST00000423821 375 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 H3F3BP1-201ENST00000440551 403 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 SNRPGP13-201ENST00000442212 177 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 C11orf94-201ENST00000449465 369 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 PHBP13-201ENST00000453244 760 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 SCARNA18B-201ENST00000458806 135 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 SNRPCP13-201ENST00000505417 190 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 RNU1-103P-201ENST00000516502 125 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AP002840.1-201ENST00000546284 524 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AC093484.3-201ENST00000578296 449 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 MIR4689-201ENST00000582517 70 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 NDUFC2-KCTD14-203ENST00000612612 530 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AC092745.3-201ENST00000622868 216 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 STEAP3-201ENST00000393106 3915 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 ZSCAN25-204ENST00000394152 4349 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 TRAF1-202ENST00000540010 4303 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 C14orf132-203ENST00000555004 7583 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AC100757.1-201ENST00000616872 1835 ntBASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 TNS1-221ENST00000615025 6488 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 CACNA1C-203ENST00000344100 6634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 ST7-203ENST00000393443 2360 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 EPHB2-203ENST00000374632 3677 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP3-3Q9BYR6 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 KCNJ3-201ENST00000295101 5021 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 EDAR-202ENST00000376651 4303 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 MTMR4-201ENST00000323456 5839 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 CORO2A-202ENST00000375077 5459 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 KCNA2-211ENST00000639233 5256 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 TTC14-203ENST00000412756 4568 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 PFKFB1-204ENST00000614686 1353 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 CCDC90B-214ENST00000529689 4014 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 IL36A-201ENST00000259211 888 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 C1orf61-204ENST00000368243 879 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 OBP2B-201ENST00000372032 702 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 SNORA51.8-201ENST00000384234 132 ntBASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 RNU6-622P-201ENST00000384272 103 ntBASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 MIR586-201ENST00000385035 97 ntBASIC4.84□□□□□ -1.63
KRTAP3-3Q9BYR6 TRBV6-8-201ENST00000390376 341 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms