Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RPL17P36-201ENST00000420302 549 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 OR6K4P-201ENST00000423179 955 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 FO393419.3-201ENST00000428741 282 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 RPL23AP1-201ENST00000428990 471 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 OR2B7P-201ENST00000429302 934 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 YWHAZP2-201ENST00000440317 728 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC007537.2-201ENST00000472093 511 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 OR52A4P-201ENST00000472867 958 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC147055.4-201ENST00000504399 745 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-1178P-201ENST00000516674 107 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 RNA5SP230-201ENST00000517039 122 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC106038.2-201ENST00000520706 568 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AL359219.2-201ENST00000555184 348 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 MIR4675-201ENST00000577898 77 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 MIR4666A-201ENST00000580160 79 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC006539.2-201ENST00000601729 572 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 U6atac.1-201ENST00000616025 117 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC121761.2-201ENST00000617300 689 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 ZNF652P1-201ENST00000442420 1309 ntBASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A3Q8N4M1 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-500P-201ENST00000362349 107 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 U3.4-201ENST00000363352 213 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 RN7SKP227-201ENST00000364445 330 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AL049697.2-201ENST00000403708 294 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 RN7SKP142-201ENST00000411236 328 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 RSU1P3-201ENST00000412878 835 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 CDK8P2-201ENST00000415020 547 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AL022400.1-201ENST00000423946 935 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC009238.2-201ENST00000431026 355 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-956P-201ENST00000458868 103 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 PPIAP21-201ENST00000464473 501 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 RPL7P1-201ENST00000468161 747 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 RPL7P9-201ENST00000468715 747 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 RPL7P18-201ENST00000478965 734 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 RN7SL814P-201ENST00000487715 300 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC010587.2-201ENST00000511727 448 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 RN7SKP21-201ENST00000516503 220 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC092747.2-201ENST00000545069 983 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC087481.2-201ENST00000565492 330 ntBASIC5.1□□□□□ -1.59
SLC44A3Q8N4M1 AC012414.6-201ENST00000568241 401 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms