Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.87□□□□□ -1.63
RIPK4P57078 VN1R81P-201ENST00000602085 372 ntBASIC4.87□□□□□ -1.63
RIPK4P57078 AC096553.1-201ENST00000605169 829 ntBASIC4.87□□□□□ -1.63
RIPK4P57078 SNORA35B-201ENST00000607417 129 ntBASIC4.87□□□□□ -1.63
RIPK4P57078 NF1P10-201ENST00000613227 742 ntBASIC4.87□□□□□ -1.63
RIPK4P57078 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.87□□□□□ -1.63
RIPK4P57078 AC020978.9-201ENST00000624380 1141 ntBASIC4.87□□□□□ -1.63
RIPK4P57078 AC091905.1-201ENST00000624400 311 ntBASIC4.87□□□□□ -1.63
RIPK4P57078 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
RIPK4P57078 CASC19-284ENST00000642142 1868 ntBASIC4.87□□□□□ -1.63
RIPK4P57078 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
RIPK4P57078 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RIPK4P57078 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RIPK4P57078 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
RIPK4P57078 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.87□□□□□ -1.63
RIPK4P57078 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RIPK4P57078 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK4P57078 SNORA5A-201ENST00000384111 134 ntBASIC4.86□□□□□ -1.63
RIPK4P57078 SNORA48.7-201ENST00000391302 135 ntBASIC4.86□□□□□ -1.63
RIPK4P57078 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK4P57078 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK4P57078 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.86□□□□□ -1.63
RIPK4P57078 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK4P57078 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 AC044797.1-201ENST00000445744 679 ntBASIC4.86□□□□□ -1.63
RIPK4P57078 YWHAQP9-201ENST00000445891 512 ntBASIC4.86□□□□□ -1.63
RIPK4P57078 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK4P57078 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK4P57078 RNA5SP143-201ENST00000516936 115 ntBASIC4.86□□□□□ -1.63
RIPK4P57078 HMGB1P23-201ENST00000518743 568 ntBASIC4.86□□□□□ -1.63
RIPK4P57078 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 AC092851.1-201ENST00000535964 478 ntBASIC4.86□□□□□ -1.63
RIPK4P57078 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK4P57078 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RIPK4P57078 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK4P57078 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK4P57078 AC092111.2-201ENST00000611627 1414 ntBASIC4.86□□□□□ -1.63
RIPK4P57078 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK4P57078 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK4P57078 AL606537.1-201ENST00000607258 2011 ntBASIC4.85□□□□□ -1.63
RIPK4P57078 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK4P57078 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RIPK4P57078 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK4P57078 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK4P57078 MIR137-201ENST00000385223 102 ntBASIC4.85□□□□□ -1.63
RIPK4P57078 MTND4LP12-201ENST00000448237 295 ntBASIC4.85□□□□□ -1.63
RIPK4P57078 APOOP2-201ENST00000461561 539 ntBASIC4.85□□□□□ -1.63
RIPK4P57078 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.85□□□□□ -1.63
RIPK4P57078 AC016687.1-201ENST00000482574 353 ntBASIC4.85□□□□□ -1.63
RIPK4P57078 AC004069.2-201ENST00000505438 1114 ntBASIC4.85□□□□□ -1.63
RIPK4P57078 AC010342.1-201ENST00000514047 877 ntBASIC4.85□□□□□ -1.63
RIPK4P57078 PAICSP4-201ENST00000517543 1253 ntBASIC4.85□□□□□ -1.63
RIPK4P57078 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.85□□□□□ -1.63
RIPK4P57078 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.85□□□□□ -1.63
RIPK4P57078 AL133247.2-201ENST00000603236 482 ntBASIC4.85□□□□□ -1.63
RIPK4P57078 AC112200.1-201ENST00000625015 234 ntBASIC4.85□□□□□ -1.63
RIPK4P57078 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.85□□□□□ -1.63
RIPK4P57078 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK4P57078 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK4P57078 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.85□□□□□ -1.63
RIPK4P57078 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIPK4P57078 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.84□□□□□ -1.63
RIPK4P57078 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.84□□□□□ -1.63
RIPK4P57078 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIPK4P57078 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.84□□□□□ -1.63
RIPK4P57078 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
RIPK4P57078 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.84□□□□□ -1.63
RIPK4P57078 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIPK4P57078 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIPK4P57078 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIPK4P57078 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RIPK4P57078 AC096644.3-201ENST00000416788 338 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 AC245054.1-201ENST00000420944 258 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RIPK4P57078 AL034379.1-201ENST00000423216 253 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 NDUFB1P1-201ENST00000435191 180 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 MTND6P5-201ENST00000448266 512 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 MTCYBP14-201ENST00000457471 715 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 AC022336.1-201ENST00000475510 337 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 AC106872.2-201ENST00000494303 480 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 HMGN1P11-201ENST00000508668 303 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 SNORD116-30-201ENST00000516468 85 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.84□□□□□ -1.63
RIPK4P57078 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.84□□□□□ -1.63
RIPK4P57078 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.84□□□□□ -1.63
RIPK4P57078 AC091515.1-201ENST00000548110 679 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.84□□□□□ -1.63
RIPK4P57078 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.84□□□□□ -1.63
RIPK4P57078 AL163642.2-201ENST00000604722 1019 ntBASIC4.84□□□□□ -1.63
RIPK4P57078 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.84□□□□□ -1.63
RIPK4P57078 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIPK4P57078 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms