Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC019050.1-201ENST00000418508 492 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN20P56880 AC010099.3-201ENST00000423896 409 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 AC009965.2-201ENST00000425328 970 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN20P56880 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 GTF2IP7-202ENST00000436677 309 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLDN20P56880 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN20P56880 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN20P56880 RN7SL41P-201ENST00000476144 297 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 RPS27P23-201ENST00000487608 251 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 AC007686.1-201ENST00000488511 463 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN20P56880 AC084024.2-201ENST00000503480 791 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 BOLA3P3-201ENST00000505182 232 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 RNU2-30P-201ENST00000516209 141 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 RNU1-6P-201ENST00000516290 144 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 CDH12P4-201ENST00000517835 295 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 CDH12P3-201ENST00000517935 295 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 CDH12P1-201ENST00000518435 295 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN20P56880 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN20P56880 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLDN20P56880 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN20P56880 CYCSP28-201ENST00000534284 321 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.28□□□□□ -1.72
CLDN20P56880 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN20P56880 MTND3P12-201ENST00000559068 328 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.28□□□□□ -1.72
CLDN20P56880 AC231759.1-201ENST00000616455 597 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 AL158196.1-201ENST00000616786 434 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN20P56880 AL592182.3-201ENST00000642132 3304 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.28□□□□□ -1.72
CLDN20P56880 ZNF876P-202ENST00000398732 1485 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
CLDN20P56880 AL049737.1-201ENST00000413920 1403 ntBASIC4.28□□□□□ -1.72
CLDN20P56880 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLDN20P56880 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.28□□□□□ -1.73
CLDN20P56880 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 MTND4P26-201ENST00000415971 1359 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLDN20P56880 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN20P56880 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN20P56880 HMGB1P5-201ENST00000255320 642 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CLDN20P56880 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLDN20P56880 GSTA8P-201ENST00000404253 637 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 U3.35-201ENST00000408405 208 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 VDAC1P9-201ENST00000412766 841 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN20P56880 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN20P56880 HIGD1AP4-201ENST00000430194 280 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN20P56880 MTCO2P20-201ENST00000437339 673 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 AC016831.4-201ENST00000438302 307 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN20P56880 Z77249.1-201ENST00000444622 1175 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 HMGB1P16-201ENST00000447155 540 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 RPL7L1P1-201ENST00000448259 785 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 RPL12P20-201ENST00000475538 479 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 RN7SL809P-201ENST00000482040 297 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 AC008897.1-201ENST00000494006 347 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CLDN20P56880 AC034244.1-201ENST00000507687 207 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 AC008885.2-201ENST00000509506 930 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN20P56880 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN20P56880 MTATP6P15-201ENST00000527233 835 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.27□□□□□ -1.73
CLDN20P56880 UBTFL10-201ENST00000528532 562 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 AP001317.1-201ENST00000531194 960 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 AC137768.1-201ENST00000549998 553 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN20P56880 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN20P56880 AC087477.6-201ENST00000559595 843 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 AADACP1-206ENST00000561502 1193 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN20P56880 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN20P56880 AC022662.1-201ENST00000580252 331 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN20P56880 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN20P56880 PCNAP1-202ENST00000595299 752 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN20P56880 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN20P56880 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLDN20P56880 AP000484.1-201ENST00000620067 1252 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 MIR7154-201ENST00000620673 73 ntBASIC4.27□□□□□ -1.73
CLDN20P56880 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN20P56880 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
CLDN20P56880 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms