Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.43□□□□□ -1.86
SNRNP200O75643 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.43□□□□□ -1.86
SNRNP200O75643 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.43□□□□□ -1.86
SNRNP200O75643 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.43□□□□□ -1.86
SNRNP200O75643 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SNRNP200O75643 AC067852.3-201ENST00000589177 561 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 SNORA51-201ENST00000606420 132 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.43□□□□□ -1.86
SNRNP200O75643 AC006946.3-201ENST00000609791 756 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 AL354976.1-201ENST00000613843 387 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 AC244517.3-201ENST00000616254 1235 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 AC079298.2-201ENST00000623885 459 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SNRNP200O75643 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNRNP200O75643 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.43□□□□□ -1.86
SNRNP200O75643 RNU1-85P-201ENST00000364127 164 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 SNORA70.4-201ENST00000365509 134 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 SNORD17-201ENST00000390930 237 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 ATP5F1P3-201ENST00000397213 657 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.43□□□□□ -1.86
SNRNP200O75643 AL691447.1-201ENST00000419456 387 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 SDCBPP2-201ENST00000424643 885 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 HIGD1AP12-201ENST00000427832 281 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.43□□□□□ -1.86
SNRNP200O75643 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.43□□□□□ -1.86
SNRNP200O75643 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.43□□□□□ -1.86
SNRNP200O75643 AP000619.3-201ENST00000535634 1127 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.43□□□□□ -1.86
SNRNP200O75643 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.43□□□□□ -1.86
SNRNP200O75643 SNORD39.4-201ENST00000620099 78 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 AL359715.5-201ENST00000623431 443 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 AP003400.2-201ENST00000624036 666 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 U6.105-201ENST00000637379 88 ntBASIC3.43□□□□□ -1.86
SNRNP200O75643 AP000542.2-201ENST00000623199 6179 ntBASIC3.42□□□□□ -1.86
SNRNP200O75643 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.42□□□□□ -1.86
SNRNP200O75643 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNRNP200O75643 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.42□□□□□ -1.86
SNRNP200O75643 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.42□□□□□ -1.86
SNRNP200O75643 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SNRNP200O75643 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.42□□□□□ -1.86
SNRNP200O75643 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNRNP200O75643 AP000907.1-201ENST00000428428 510 ntBASIC3.42□□□□□ -1.86
SNRNP200O75643 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.42□□□□□ -1.86
SNRNP200O75643 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.42□□□□□ -1.86
SNRNP200O75643 SETD6P1-201ENST00000444575 317 ntBASIC3.42□□□□□ -1.86
SNRNP200O75643 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.42□□□□□ -1.86
SNRNP200O75643 APOOP2-201ENST00000461561 539 ntBASIC3.42□□□□□ -1.86
SNRNP200O75643 AC084357.1-201ENST00000473404 255 ntBASIC3.42□□□□□ -1.86
SNRNP200O75643 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNRNP200O75643 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.42□□□□□ -1.86
SNRNP200O75643 AC008489.1-201ENST00000524271 483 ntBASIC3.42□□□□□ -1.86
SNRNP200O75643 AL137072.1-201ENST00000603444 466 ntBASIC3.42□□□□□ -1.86
SNRNP200O75643 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.42□□□□□ -1.86
SNRNP200O75643 AC074029.4-201ENST00000624796 1859 ntBASIC3.42□□□□□ -1.86
SNRNP200O75643 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNRNP200O75643 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.42□□□□□ -1.86
SNRNP200O75643 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SNRNP200O75643 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.42□□□□□ -1.86
SNRNP200O75643 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SNRNP200O75643 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNRNP200O75643 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 AC004552.1-201ENST00000419089 348 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 RPS26P3-201ENST00000470205 348 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 AC025518.1-201ENST00000479856 347 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 AC090543.2-201ENST00000483963 348 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 AC004057.1-201ENST00000485827 348 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 HMGN1P11-201ENST00000508668 303 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.41□□□□□ -1.86
SNRNP200O75643 RN7SKP209-201ENST00000516888 304 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.41□□□□□ -1.86
SNRNP200O75643 OR5B10P-201ENST00000532869 642 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.41□□□□□ -1.86
SNRNP200O75643 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNRNP200O75643 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SNRNP200O75643 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNRNP200O75643 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
SNRNP200O75643 AC233968.1-201ENST00000611212 1300 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNRNP200O75643 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNRNP200O75643 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNRNP200O75643 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SNRNP200O75643 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.41□□□□□ -1.86
SNRNP200O75643 AC096644.3-201ENST00000416788 338 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.41□□□□□ -1.86
SNRNP200O75643 AC018644.1-201ENST00000429934 551 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 BMS1P19-201ENST00000433925 393 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.41□□□□□ -1.86
SNRNP200O75643 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.41□□□□□ -1.86
SNRNP200O75643 RPL7L1P8-201ENST00000469911 741 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 AC069499.1-201ENST00000489433 509 ntBASIC3.41□□□□□ -1.86
SNRNP200O75643 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SNRNP200O75643 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.41□□□□□ -1.86
SNRNP200O75643 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.41□□□□□ -1.86
SNRNP200O75643 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNRNP200O75643 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNRNP200O75643 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNRNP200O75643 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SNRNP200O75643 SNORA63.1-201ENST00000362493 131 ntBASIC3.4□□□□□ -1.86
SNRNP200O75643 AL357552.1-201ENST00000445254 415 ntBASIC3.4□□□□□ -1.86
SNRNP200O75643 RPS4XP10-201ENST00000465034 731 ntBASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms