Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC109454.4-201ENST00000623411 649 ntBASIC4.16□□□□□ -1.74
PRKNO60260 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 CASC19-204ENST00000641001 2055 ntBASIC4.16□□□□□ -1.74
PRKNO60260 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 AC139769.1-204ENST00000472297 1931 ntBASIC4.16□□□□□ -1.74
PRKNO60260 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.16□□□□□ -1.74
PRKNO60260 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRKNO60260 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.16□□□□□ -1.74
PRKNO60260 AC138393.1-206ENST00000540997 1886 ntBASIC4.15□□□□□ -1.74
PRKNO60260 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.15□□□□□ -1.74
PRKNO60260 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRKNO60260 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRKNO60260 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.15□□□□□ -1.74
PRKNO60260 NEAT1-202ENST00000501122 22743 ntBASIC4.15□□□□□ -1.74
PRKNO60260 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
PRKNO60260 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.15□□□□□ -1.74
PRKNO60260 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.15□□□□□ -1.75
PRKNO60260 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRKNO60260 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PRKNO60260 AC008033.1-201ENST00000216407 1162 ntBASIC4.15□□□□□ -1.75
PRKNO60260 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRKNO60260 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRKNO60260 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PRKNO60260 RNU6-1339P-201ENST00000363574 91 ntBASIC4.15□□□□□ -1.75
PRKNO60260 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.15□□□□□ -1.75
PRKNO60260 UBBP2-201ENST00000376781 231 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.15□□□□□ -1.75
PRKNO60260 AC119751.3-201ENST00000399720 670 ntBASIC4.15□□□□□ -1.75
PRKNO60260 RN7SKP167-201ENST00000411047 285 ntBASIC4.15□□□□□ -1.75
PRKNO60260 RPS20P14-201ENST00000412545 360 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AL008987.1-201ENST00000415528 237 ntBASIC4.15□□□□□ -1.75
PRKNO60260 P2RY10P2-201ENST00000416730 913 ntBASIC4.15□□□□□ -1.75
PRKNO60260 Z75741.2-201ENST00000417272 1167 ntBASIC4.15□□□□□ -1.75
PRKNO60260 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.15□□□□□ -1.75
PRKNO60260 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PRKNO60260 AL356387.2-201ENST00000422272 243 ntBASIC4.15□□□□□ -1.75
PRKNO60260 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PRKNO60260 RPS6P15-201ENST00000431996 751 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.15□□□□□ -1.75
PRKNO60260 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.15□□□□□ -1.75
PRKNO60260 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.15□□□□□ -1.75
PRKNO60260 FHP1-201ENST00000442741 703 ntBASIC4.15□□□□□ -1.75
PRKNO60260 MTND2P22-201ENST00000444325 1033 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.15□□□□□ -1.75
PRKNO60260 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.15□□□□□ -1.75
PRKNO60260 AC012671.1-201ENST00000451912 203 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AC112206.1-201ENST00000468416 477 ntBASIC4.15□□□□□ -1.75
PRKNO60260 NDUFA5P9-201ENST00000472609 340 ntBASIC4.15□□□□□ -1.75
PRKNO60260 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.15□□□□□ -1.75
PRKNO60260 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PRKNO60260 AP000563.1-201ENST00000490865 758 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.15□□□□□ -1.75
PRKNO60260 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.15□□□□□ -1.75
PRKNO60260 HMGB1P23-201ENST00000518743 568 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.15□□□□□ -1.75
PRKNO60260 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.15□□□□□ -1.75
PRKNO60260 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PRKNO60260 NIFKP8-201ENST00000560500 874 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.15□□□□□ -1.75
PRKNO60260 MIR5708-201ENST00000579723 85 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.15□□□□□ -1.75
PRKNO60260 BNIP3P24-201ENST00000593398 557 ntBASIC4.15□□□□□ -1.75
PRKNO60260 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.15□□□□□ -1.75
PRKNO60260 AC021171.1-201ENST00000603137 706 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AL008729.2-201ENST00000606393 473 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AC023813.4-201ENST00000607580 580 ntBASIC4.15□□□□□ -1.75
PRKNO60260 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.15□□□□□ -1.75
PRKNO60260 MIR6891-201ENST00000618788 93 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AC079416.3-201ENST00000624479 549 ntBASIC4.15□□□□□ -1.75
PRKNO60260 AC009039.2-201ENST00000624524 529 ntBASIC4.15□□□□□ -1.75
PRKNO60260 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.15□□□□□ -1.75
PRKNO60260 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.15□□□□□ -1.75
PRKNO60260 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRKNO60260 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.15□□□□□ -1.75
PRKNO60260 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PRKNO60260 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRKNO60260 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.14□□□□□ -1.75
PRKNO60260 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRKNO60260 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRKNO60260 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRKNO60260 NSRP1P1-201ENST00000444067 1693 ntBASIC4.14□□□□□ -1.75
PRKNO60260 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
PRKNO60260 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKNO60260 RN7SKP224-201ENST00000364140 325 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms