Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTCBQ9Y3I0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 AL645929.1-201ENST00000420084 975 ntBASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 PRELID1P1-202ENST00000567272 903 ntBASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 RN7SL510P-201ENST00000581311 263 ntBASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 AC092329.2-201ENST00000598402 547 ntBASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
RTCBQ9Y3I0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTCBQ9Y3I0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
RTCBQ9Y3I0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.4■■□□□ 1.5
RTCBQ9Y3I0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.4■■□□□ 1.5
RTCBQ9Y3I0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RTCBQ9Y3I0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RTCBQ9Y3I0 CR769767.2-201ENST00000622735 460 ntBASIC24.4■■□□□ 1.5
RTCBQ9Y3I0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RTCBQ9Y3I0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTCBQ9Y3I0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTCBQ9Y3I0 AC026310.3-201ENST00000625186 2373 ntBASIC24.39■■□□□ 1.5
RTCBQ9Y3I0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC24.39■■□□□ 1.5
RTCBQ9Y3I0 AC012676.1-201ENST00000574705 1949 ntBASIC24.39■■□□□ 1.5
RTCBQ9Y3I0 TBC1D3P2-202ENST00000577902 1649 ntBASIC24.39■■□□□ 1.5
RTCBQ9Y3I0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTCBQ9Y3I0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTCBQ9Y3I0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.5
RTCBQ9Y3I0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC24.39■■□□□ 1.5
RTCBQ9Y3I0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
RTCBQ9Y3I0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 RASA4DP-201ENST00000460726 1199 ntBASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTCBQ9Y3I0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms