Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 PRORSD1P-201ENST00000295112 541 ntBASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP4E1Q9UPM8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4E1Q9UPM8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4E1Q9UPM8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4E1Q9UPM8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4E1Q9UPM8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
AP4E1Q9UPM8 LINC01465-201ENST00000408887 1940 ntBASIC20.08■□□□□ 0.8
AP4E1Q9UPM8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 AL359736.2-201ENST00000621992 437 ntBASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 HLA-A-209ENST00000638375 975 ntBASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4E1Q9UPM8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 ABHD17AP1-201ENST00000358206 933 ntBASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP4E1Q9UPM8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 AIRN-201ENST00000601203 4374 ntBASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 FAM197Y4-202ENST00000622692 608 ntBASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 TEX21P-204ENST00000641479 1693 ntBASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
AP4E1Q9UPM8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.04■□□□□ 0.8
AP4E1Q9UPM8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms