Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBQLN1Q9UMX0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 TREX1-205ENST00000625293 1783 ntBASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 CYP2D8P-201ENST00000433633 1490 ntBASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
UBQLN1Q9UMX0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBQLN1Q9UMX0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.77■□□□□ 0.91
UBQLN1Q9UMX0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 MFAP1P1-201ENST00000442257 1255 ntBASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 C2orf69P3-201ENST00000565542 1120 ntBASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 AC145285.6-201ENST00000604632 637 ntBASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 AC010947.1-201ENST00000623454 693 ntBASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 AC125437.2-201ENST00000625180 2167 ntBASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
UBQLN1Q9UMX0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBQLN1Q9UMX0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
UBQLN1Q9UMX0 LINC01568-207ENST00000641790 1380 ntBASIC20.74■□□□□ 0.91
UBQLN1Q9UMX0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN1Q9UMX0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN1Q9UMX0 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.74■□□□□ 0.91
UBQLN1Q9UMX0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBQLN1Q9UMX0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms