Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 FP475955.4-201ENST00000623131 1990 ntBASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 AC131281.2-201ENST00000520478 145 ntBASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COMMD3Q9UBI1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 AC012313.1-201ENST00000593393 3059 ntBASIC17■□□□□ 0.31
COMMD3Q9UBI1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 AC012414.1-201ENST00000556676 535 ntBASIC17■□□□□ 0.31
COMMD3Q9UBI1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COMMD3Q9UBI1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COMMD3Q9UBI1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 AC243732.1-201ENST00000612648 864 ntBASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COMMD3Q9UBI1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 CDV3P1-201ENST00000471403 739 ntBASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 DUX4L2-201ENST00000561772 1275 ntBASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 AL136162.1-201ENST00000607711 1078 ntBASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 DUX4L6-201ENST00000626483 1275 ntBASIC16.98■□□□□ 0.31
COMMD3Q9UBI1 DUX4L1-201ENST00000627662 1275 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms