Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.2■□□□□ 0.82
DNMT3BQ9UBC3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNMT3BQ9UBC3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 LINC01006-201ENST00000333319 2292 ntBASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 AC092647.4-201ENST00000457211 535 ntBASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
DNMT3BQ9UBC3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 AP003041.3-201ENST00000527151 707 ntBASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.18■□□□□ 0.82
DNMT3BQ9UBC3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 AC009237.14-201ENST00000609975 1594 ntBASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 AL512604.3-201ENST00000569583 964 ntBASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DNMT3BQ9UBC3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 AL031432.5-201ENST00000641059 760 ntBASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DNMT3BQ9UBC3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms