Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00474Q9P2X8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 POU5F1P3-201ENST00000428824 1078 ntBASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 YBX1P10-201ENST00000444752 975 ntBASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 TFP1-202ENST00000475455 1573 ntBASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC00474Q9P2X8 TCF3P1-201ENST00000423021 1937 ntBASIC12.58□□□□□ -0.39
LINC00474Q9P2X8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
LINC00474Q9P2X8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 AC069544.1-201ENST00000609399 999 ntBASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC00474Q9P2X8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 KRT18P29-201ENST00000397031 1267 ntBASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC00474Q9P2X8 AC006058.3-201ENST00000606217 1069 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms