Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CISHQ9NSE2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CISHQ9NSE2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CISHQ9NSE2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CISHQ9NSE2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 AL160286.2-201ENST00000567150 934 ntBASIC20.65■□□□□ 0.9
CISHQ9NSE2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CISHQ9NSE2 Z99916.2-201ENST00000604037 246 ntBASIC20.65■□□□□ 0.9
CISHQ9NSE2 AC073195.1-201ENST00000607241 877 ntBASIC20.65■□□□□ 0.9
CISHQ9NSE2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CISHQ9NSE2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CISHQ9NSE2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CISHQ9NSE2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.65■□□□□ 0.9
CISHQ9NSE2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CISHQ9NSE2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CISHQ9NSE2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.64■□□□□ 0.89
CISHQ9NSE2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CISHQ9NSE2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CISHQ9NSE2 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.64■□□□□ 0.89
CISHQ9NSE2 AC012618.2-201ENST00000428058 849 ntBASIC20.64■□□□□ 0.89
CISHQ9NSE2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.64■□□□□ 0.89
CISHQ9NSE2 AC008550.1-201ENST00000511500 884 ntBASIC20.64■□□□□ 0.89
CISHQ9NSE2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CISHQ9NSE2 AC233702.5-201ENST00000584107 538 ntBASIC20.64■□□□□ 0.89
CISHQ9NSE2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CISHQ9NSE2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CISHQ9NSE2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CISHQ9NSE2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 CR392000.1-201ENST00000624770 1228 ntBASIC20.63■□□□□ 0.89
CISHQ9NSE2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.63■□□□□ 0.89
CISHQ9NSE2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CISHQ9NSE2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CISHQ9NSE2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.62■□□□□ 0.89
CISHQ9NSE2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CISHQ9NSE2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 AC004980.1-204ENST00000429707 299 ntBASIC20.62■□□□□ 0.89
CISHQ9NSE2 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.62■□□□□ 0.89
CISHQ9NSE2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.62■□□□□ 0.89
CISHQ9NSE2 AP006294.2-201ENST00000641667 209 ntBASIC20.62■□□□□ 0.89
CISHQ9NSE2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.62■□□□□ 0.89
CISHQ9NSE2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.62■□□□□ 0.89
CISHQ9NSE2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.62■□□□□ 0.89
CISHQ9NSE2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CISHQ9NSE2 KRT16P1-201ENST00000399124 1418 ntBASIC20.61■□□□□ 0.89
CISHQ9NSE2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 AC131212.4-201ENST00000623606 975 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms