Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 AL390719.1-204ENST00000412397 1219 ntBASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 MKRN4P-201ENST00000444706 1521 ntBASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 BX276092.2-201ENST00000417668 665 ntBASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 RPS2P52-201ENST00000469610 820 ntBASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC52A3Q9NQ40 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC52A3Q9NQ40 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 YBX1P10-201ENST00000444752 975 ntBASIC18.29■□□□□ 0.52
SLC52A3Q9NQ40 AC006557.6-201ENST00000623071 864 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms