Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 UPF3AP3-201ENST00000420996 769 ntBASIC18.06■□□□□ 0.48
CHD8Q9HCK8 RFPL4AP1-201ENST00000530883 850 ntBASIC18.06■□□□□ 0.48
CHD8Q9HCK8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 KRT8P17-201ENST00000453110 1448 ntBASIC18.06■□□□□ 0.48
CHD8Q9HCK8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.06■□□□□ 0.48
CHD8Q9HCK8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD8Q9HCK8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD8Q9HCK8 AL121603.2-201ENST00000557373 2117 ntBASIC18.05■□□□□ 0.48
CHD8Q9HCK8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 RPS8P6-201ENST00000426177 609 ntBASIC18.04■□□□□ 0.48
CHD8Q9HCK8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD8Q9HCK8 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 C1orf229-201ENST00000623686 2258 ntBASIC18.03■□□□□ 0.48
CHD8Q9HCK8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD8Q9HCK8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD8Q9HCK8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD8Q9HCK8 DNAJB3-202ENST00000449667 1266 ntBASIC18.02■□□□□ 0.48
CHD8Q9HCK8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.02■□□□□ 0.48
CHD8Q9HCK8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.02■□□□□ 0.48
CHD8Q9HCK8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.02■□□□□ 0.48
CHD8Q9HCK8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
CHD8Q9HCK8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD8Q9HCK8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHD8Q9HCK8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.02■□□□□ 0.48
CHD8Q9HCK8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHD8Q9HCK8 AC018712.1-201ENST00000455767 687 ntBASIC18.02■□□□□ 0.47
CHD8Q9HCK8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CHD8Q9HCK8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.02■□□□□ 0.47
CHD8Q9HCK8 IGHV3-22-201ENST00000520721 359 ntBASIC18.02■□□□□ 0.47
CHD8Q9HCK8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.02■□□□□ 0.47
CHD8Q9HCK8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHD8Q9HCK8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.02■□□□□ 0.47
CHD8Q9HCK8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHD8Q9HCK8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms