Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.6■■□□□ 1.05
CBX8Q9HC52 NOC2LP1-202ENST00000452600 2235 ntBASIC21.6■■□□□ 1.05
CBX8Q9HC52 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CBX8Q9HC52 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
CBX8Q9HC52 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CBX8Q9HC52 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CBX8Q9HC52 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CBX8Q9HC52 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CBX8Q9HC52 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.58■■□□□ 1.05
CBX8Q9HC52 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CBX8Q9HC52 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CBX8Q9HC52 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
CBX8Q9HC52 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.58■■□□□ 1.05
CBX8Q9HC52 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CBX8Q9HC52 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CBX8Q9HC52 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CBX8Q9HC52 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CBX8Q9HC52 CYP2T1P-201ENST00000432607 1285 ntBASIC21.58■■□□□ 1.05
CBX8Q9HC52 KRT18P11-201ENST00000435214 1283 ntBASIC21.58■■□□□ 1.05
CBX8Q9HC52 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CBX8Q9HC52 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.58■■□□□ 1.05
CBX8Q9HC52 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.58■■□□□ 1.05
CBX8Q9HC52 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.58■■□□□ 1.05
CBX8Q9HC52 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CBX8Q9HC52 AL589743.5-201ENST00000616611 1050 ntBASIC21.58■■□□□ 1.05
CBX8Q9HC52 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.58■■□□□ 1.05
CBX8Q9HC52 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CBX8Q9HC52 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CBX8Q9HC52 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.58■■□□□ 1.04
CBX8Q9HC52 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.58■■□□□ 1.04
CBX8Q9HC52 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.58■■□□□ 1.04
CBX8Q9HC52 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.58■■□□□ 1.04
CBX8Q9HC52 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CBX8Q9HC52 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CBX8Q9HC52 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CBX8Q9HC52 AC020763.4-201ENST00000623414 4170 ntBASIC21.58■■□□□ 1.04
CBX8Q9HC52 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CBX8Q9HC52 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.58■■□□□ 1.04
CBX8Q9HC52 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CBX8Q9HC52 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CBX8Q9HC52 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CBX8Q9HC52 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CBX8Q9HC52 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.57■■□□□ 1.04
CBX8Q9HC52 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CBX8Q9HC52 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
CBX8Q9HC52 AC104417.2-201ENST00000562989 1793 ntBASIC21.57■■□□□ 1.04
CBX8Q9HC52 KRT17P1-201ENST00000399211 1546 ntBASIC21.57■■□□□ 1.04
CBX8Q9HC52 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.57■■□□□ 1.04
CBX8Q9HC52 ZNRF2P3-201ENST00000424200 374 ntBASIC21.57■■□□□ 1.04
CBX8Q9HC52 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.57■■□□□ 1.04
CBX8Q9HC52 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CBX8Q9HC52 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CBX8Q9HC52 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CBX8Q9HC52 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CBX8Q9HC52 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CBX8Q9HC52 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.57■■□□□ 1.04
CBX8Q9HC52 IRX1P1-201ENST00000438849 1838 ntBASIC21.57■■□□□ 1.04
CBX8Q9HC52 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CBX8Q9HC52 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CBX8Q9HC52 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.56■■□□□ 1.04
CBX8Q9HC52 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CBX8Q9HC52 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CBX8Q9HC52 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CBX8Q9HC52 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.56■■□□□ 1.04
CBX8Q9HC52 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.56■■□□□ 1.04
CBX8Q9HC52 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.56■■□□□ 1.04
CBX8Q9HC52 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CBX8Q9HC52 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.56■■□□□ 1.04
CBX8Q9HC52 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.56■■□□□ 1.04
CBX8Q9HC52 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms