Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC116562.4-201ENST00000641316 2276 ntBASIC19.12■□□□□ 0.65
POLR1BQ9H9Y6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 KRT8P9-201ENST00000558927 1449 ntBASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 LINC01568-207ENST00000641790 1380 ntBASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 MIR1238-201ENST00000408483 83 ntBASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 AC113347.1-201ENST00000413321 391 ntBASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
POLR1BQ9H9Y6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
POLR1BQ9H9Y6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 KRT18P22-201ENST00000402024 1347 ntBASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 NAPSB-206ENST00000562112 1266 ntBASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 AC011484.1-201ENST00000377652 1995 ntBASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
POLR1BQ9H9Y6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
POLR1BQ9H9Y6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms