Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PIF1Q9H611 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PIF1Q9H611 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PIF1Q9H611 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PIF1Q9H611 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.46■□□□□ 0.55
PIF1Q9H611 CNN2P6-201ENST00000439038 900 ntBASIC18.46■□□□□ 0.55
PIF1Q9H611 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.46■□□□□ 0.55
PIF1Q9H611 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.46■□□□□ 0.55
PIF1Q9H611 CYP2T3P-201ENST00000601990 817 ntBASIC18.46■□□□□ 0.55
PIF1Q9H611 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.46■□□□□ 0.55
PIF1Q9H611 AC092437.1-201ENST00000624794 1048 ntBASIC18.46■□□□□ 0.55
PIF1Q9H611 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PIF1Q9H611 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.46■□□□□ 0.55
PIF1Q9H611 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PIF1Q9H611 AL138781.2-201ENST00000617896 1843 ntBASIC18.46■□□□□ 0.55
PIF1Q9H611 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PIF1Q9H611 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
PIF1Q9H611 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PIF1Q9H611 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PIF1Q9H611 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PIF1Q9H611 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.45■□□□□ 0.54
PIF1Q9H611 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PIF1Q9H611 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PIF1Q9H611 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PIF1Q9H611 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PIF1Q9H611 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PIF1Q9H611 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PIF1Q9H611 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.45■□□□□ 0.54
PIF1Q9H611 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PIF1Q9H611 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PIF1Q9H611 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.45■□□□□ 0.54
PIF1Q9H611 DUX4L16-201ENST00000555130 1264 ntBASIC18.45■□□□□ 0.54
PIF1Q9H611 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PIF1Q9H611 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PIF1Q9H611 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PIF1Q9H611 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.45■□□□□ 0.54
PIF1Q9H611 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PIF1Q9H611 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.45■□□□□ 0.54
PIF1Q9H611 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PIF1Q9H611 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PIF1Q9H611 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.44■□□□□ 0.54
PIF1Q9H611 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.44■□□□□ 0.54
PIF1Q9H611 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PIF1Q9H611 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PIF1Q9H611 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.44■□□□□ 0.54
PIF1Q9H611 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.44■□□□□ 0.54
PIF1Q9H611 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.44■□□□□ 0.54
PIF1Q9H611 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.44■□□□□ 0.54
PIF1Q9H611 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.44■□□□□ 0.54
PIF1Q9H611 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PIF1Q9H611 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.44■□□□□ 0.54
PIF1Q9H611 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PIF1Q9H611 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
PIF1Q9H611 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PIF1Q9H611 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.43■□□□□ 0.54
PIF1Q9H611 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.43■□□□□ 0.54
PIF1Q9H611 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
PIF1Q9H611 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.43■□□□□ 0.54
PIF1Q9H611 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PIF1Q9H611 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
PIF1Q9H611 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PIF1Q9H611 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PIF1Q9H611 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
PIF1Q9H611 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.42■□□□□ 0.54
PIF1Q9H611 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.42■□□□□ 0.54
PIF1Q9H611 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PIF1Q9H611 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PIF1Q9H611 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PIF1Q9H611 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PIF1Q9H611 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PIF1Q9H611 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PIF1Q9H611 AC006333.2-201ENST00000607957 2099 ntBASIC18.42■□□□□ 0.54
PIF1Q9H611 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.42■□□□□ 0.54
PIF1Q9H611 TEX21P-204ENST00000641479 1693 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms