Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDH11XQ9BZA7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
PCDH11XQ9BZA7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 LINC01311-201ENST00000565162 1445 ntBASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDH11XQ9BZA7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDH11XQ9BZA7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDH11XQ9BZA7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDH11XQ9BZA7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC25.14■■□□□ 1.61
PCDH11XQ9BZA7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC25.14■■□□□ 1.61
PCDH11XQ9BZA7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.14■■□□□ 1.61
PCDH11XQ9BZA7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.14■■□□□ 1.61
PCDH11XQ9BZA7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.14■■□□□ 1.61
PCDH11XQ9BZA7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 TPM4P1-201ENST00000436100 807 ntBASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 AC073314.1-201ENST00000568729 2216 ntBASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 TBC1D3P2-202ENST00000577902 1649 ntBASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDH11XQ9BZA7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 AL512408.1-201ENST00000569378 2000 ntBASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDH11XQ9BZA7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 SPDYE13P-201ENST00000445314 798 ntBASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 FGF14-AS2-201ENST00000606448 1074 ntBASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDH11XQ9BZA7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 CR769767.2-201ENST00000622735 460 ntBASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDH11XQ9BZA7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH11XQ9BZA7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PCDH11XQ9BZA7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH11XQ9BZA7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDH11XQ9BZA7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDH11XQ9BZA7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms