Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 AP001271.2-201ENST00000624018 1556 ntBASIC11.5□□□□□ -0.57
LIMD2Q9BT23 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 AFG3L1P-217ENST00000557444 2447 ntBASIC11.5□□□□□ -0.57
LIMD2Q9BT23 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 TCF3P1-201ENST00000423021 1937 ntBASIC11.5□□□□□ -0.57
LIMD2Q9BT23 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LIMD2Q9BT23 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 VPS53-216ENST00000574029 585 ntTSL 4 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 AL121832.2-201ENST00000610979 668 ntBASIC11.49□□□□□ -0.57
LIMD2Q9BT23 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 AC004408.2-201ENST00000623613 2777 ntBASIC11.49□□□□□ -0.57
LIMD2Q9BT23 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC11.49□□□□□ -0.57
LIMD2Q9BT23 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms