Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 NUDT16P1-203ENST00000513809 620 ntBASIC20.55■□□□□ 0.88
TWNKQ96RR1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.55■□□□□ 0.88
TWNKQ96RR1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.55■□□□□ 0.88
TWNKQ96RR1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.55■□□□□ 0.88
TWNKQ96RR1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.55■□□□□ 0.88
TWNKQ96RR1 AC131212.4-201ENST00000623606 975 ntBASIC20.55■□□□□ 0.88
TWNKQ96RR1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TWNKQ96RR1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
TWNKQ96RR1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TWNKQ96RR1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.55■□□□□ 0.88
TWNKQ96RR1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TWNKQ96RR1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TWNKQ96RR1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TWNKQ96RR1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.54■□□□□ 0.88
TWNKQ96RR1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TWNKQ96RR1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TWNKQ96RR1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TWNKQ96RR1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.54■□□□□ 0.88
TWNKQ96RR1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TWNKQ96RR1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.54■□□□□ 0.88
TWNKQ96RR1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.54■□□□□ 0.88
TWNKQ96RR1 AL031985.4-201ENST00000642138 673 ntBASIC20.54■□□□□ 0.88
TWNKQ96RR1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TWNKQ96RR1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TWNKQ96RR1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TWNKQ96RR1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.54■□□□□ 0.88
TWNKQ96RR1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TWNKQ96RR1 RCC2P6-201ENST00000526625 1557 ntBASIC20.54■□□□□ 0.88
TWNKQ96RR1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TWNKQ96RR1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.54■□□□□ 0.88
TWNKQ96RR1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TWNKQ96RR1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TWNKQ96RR1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 REXO1L10P-201ENST00000615707 1290 ntBASIC20.53■□□□□ 0.88
TWNKQ96RR1 REXO1L12P-201ENST00000622156 912 ntBASIC20.53■□□□□ 0.88
TWNKQ96RR1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TWNKQ96RR1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.53■□□□□ 0.88
TWNKQ96RR1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TWNKQ96RR1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TWNKQ96RR1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TWNKQ96RR1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 B3GAT3P1-201ENST00000471720 806 ntBASIC20.52■□□□□ 0.88
TWNKQ96RR1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 AP003071.4-201ENST00000562276 1284 ntBASIC20.52■□□□□ 0.88
TWNKQ96RR1 AC026271.3-201ENST00000571884 352 ntBASIC20.52■□□□□ 0.88
TWNKQ96RR1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TWNKQ96RR1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TWNKQ96RR1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.52■□□□□ 0.88
TWNKQ96RR1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TWNKQ96RR1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TWNKQ96RR1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.51■□□□□ 0.87
TWNKQ96RR1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.51■□□□□ 0.87
TWNKQ96RR1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.51■□□□□ 0.87
TWNKQ96RR1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.51■□□□□ 0.87
TWNKQ96RR1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TWNKQ96RR1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.51■□□□□ 0.87
TWNKQ96RR1 AL032819.2-201ENST00000624543 2162 ntBASIC20.51■□□□□ 0.87
TWNKQ96RR1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TWNKQ96RR1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TWNKQ96RR1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms