Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.33■□□□□ 0.52
BBS4Q96RK4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
BBS4Q96RK4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
BBS4Q96RK4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
BBS4Q96RK4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BBS4Q96RK4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BBS4Q96RK4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BBS4Q96RK4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BBS4Q96RK4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.32■□□□□ 0.52
BBS4Q96RK4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BBS4Q96RK4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BBS4Q96RK4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BBS4Q96RK4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.32■□□□□ 0.52
BBS4Q96RK4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BBS4Q96RK4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BBS4Q96RK4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BBS4Q96RK4 KRT18P16-201ENST00000510337 1294 ntBASIC18.32■□□□□ 0.52
BBS4Q96RK4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.32■□□□□ 0.52
BBS4Q96RK4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.32■□□□□ 0.52
BBS4Q96RK4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.32■□□□□ 0.52
BBS4Q96RK4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BBS4Q96RK4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.32■□□□□ 0.52
BBS4Q96RK4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BBS4Q96RK4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BBS4Q96RK4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
BBS4Q96RK4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BBS4Q96RK4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.32■□□□□ 0.52
BBS4Q96RK4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 ZNF815P-204ENST00000434898 1737 ntBASIC18.31■□□□□ 0.52
BBS4Q96RK4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
BBS4Q96RK4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BBS4Q96RK4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.3■□□□□ 0.52
BBS4Q96RK4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BBS4Q96RK4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms