Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 AC141586.3-201ENST00000562166 1838 ntBASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 KRT18P29-201ENST00000397031 1267 ntBASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.95■□□□□ 0.78
CSPG4P5Q96PW8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.94■□□□□ 0.78
CSPG4P5Q96PW8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 PRORSD1P-201ENST00000295112 541 ntBASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 AC018445.3-201ENST00000624177 1945 ntBASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CSPG4P5Q96PW8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 AC087289.5-201ENST00000586076 3175 ntBASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 AL359736.2-201ENST00000621992 437 ntBASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CSPG4P5Q96PW8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms