Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 FAM207BP-201ENST00000447172 505 ntBASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 AP000692.2-201ENST00000608391 879 ntBASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCD1Q96GM5 KRT8P41-201ENST00000533985 1514 ntBASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 MMP23A-201ENST00000234610 1017 ntBASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 MIR1238-201ENST00000408483 83 ntBASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 AC008040.2-201ENST00000461049 708 ntBASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 FITM1-202ENST00000559294 800 ntBASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.37■□□□□ 0.85
SMARCD1Q96GM5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 AC087499.1-201ENST00000418141 1075 ntBASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCD1Q96GM5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 AL390955.1-201ENST00000428694 934 ntBASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 AC097488.1-201ENST00000507834 756 ntBASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 AP005242.2-201ENST00000580065 1175 ntBASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.35■□□□□ 0.85
SMARCD1Q96GM5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCD1Q96GM5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms