Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
IFT43Q96FT9 TFP1-202ENST00000475455 1573 ntBASIC19.91■□□□□ 0.78
IFT43Q96FT9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
IFT43Q96FT9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.91■□□□□ 0.78
IFT43Q96FT9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.91■□□□□ 0.78
IFT43Q96FT9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.91■□□□□ 0.78
IFT43Q96FT9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 AL135905.2-201ENST00000584934 1404 ntBASIC19.91■□□□□ 0.78
IFT43Q96FT9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IFT43Q96FT9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
IFT43Q96FT9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 AC239809.2-201ENST00000415381 517 ntBASIC19.9■□□□□ 0.78
IFT43Q96FT9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 AC233702.5-201ENST00000584107 538 ntBASIC19.9■□□□□ 0.78
IFT43Q96FT9 AP001412.1-201ENST00000608405 714 ntBASIC19.9■□□□□ 0.78
IFT43Q96FT9 AC110285.5-201ENST00000611501 352 ntBASIC19.9■□□□□ 0.78
IFT43Q96FT9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
IFT43Q96FT9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IFT43Q96FT9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
IFT43Q96FT9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
IFT43Q96FT9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.89■□□□□ 0.77
IFT43Q96FT9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.89■□□□□ 0.77
IFT43Q96FT9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
IFT43Q96FT9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
IFT43Q96FT9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.89■□□□□ 0.77
IFT43Q96FT9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
IFT43Q96FT9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IFT43Q96FT9 AL121829.2-201ENST00000620908 328 ntBASIC19.89■□□□□ 0.77
IFT43Q96FT9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
IFT43Q96FT9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
IFT43Q96FT9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IFT43Q96FT9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
IFT43Q96FT9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
IFT43Q96FT9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.88■□□□□ 0.77
IFT43Q96FT9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
IFT43Q96FT9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
IFT43Q96FT9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 RPS2P55-201ENST00000397318 883 ntBASIC19.88■□□□□ 0.77
IFT43Q96FT9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.88■□□□□ 0.77
IFT43Q96FT9 AC107956.1-201ENST00000494359 873 ntBASIC19.88■□□□□ 0.77
IFT43Q96FT9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.88■□□□□ 0.77
IFT43Q96FT9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.88■□□□□ 0.77
IFT43Q96FT9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.88■□□□□ 0.77
IFT43Q96FT9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
IFT43Q96FT9 AL023875.1-201ENST00000640777 796 ntBASIC19.88■□□□□ 0.77
IFT43Q96FT9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.88■□□□□ 0.77
IFT43Q96FT9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
IFT43Q96FT9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IFT43Q96FT9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
IFT43Q96FT9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
IFT43Q96FT9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms