Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
VPS33AQ96AX1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 AC141586.3-201ENST00000562166 1838 ntBASIC18.57■□□□□ 0.56
VPS33AQ96AX1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VPS33AQ96AX1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.56■□□□□ 0.56
VPS33AQ96AX1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 GPX1P1-201ENST00000388829 606 ntBASIC18.55■□□□□ 0.56
VPS33AQ96AX1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 AL512625.2-201ENST00000417533 625 ntBASIC18.55■□□□□ 0.56
VPS33AQ96AX1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 RARRES2P6-201ENST00000567333 442 ntBASIC18.55■□□□□ 0.56
VPS33AQ96AX1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.55■□□□□ 0.56
VPS33AQ96AX1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms