Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.84■■□□□ 1.09
VTI1AQ96AJ9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VTI1AQ96AJ9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 FAM207BP-201ENST00000447172 505 ntBASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 AC092647.4-201ENST00000457211 535 ntBASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.83■■□□□ 1.09
VTI1AQ96AJ9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.83■■□□□ 1.08
VTI1AQ96AJ9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VTI1AQ96AJ9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 AC008040.2-201ENST00000461049 708 ntBASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 SLC25A24-204ENST00000569674 2357 ntBASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.82■■□□□ 1.08
VTI1AQ96AJ9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VTI1AQ96AJ9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 PHGDH-210ENST00000641115 1638 ntBASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 AC099778.1-201ENST00000568593 1911 ntBASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VTI1AQ96AJ9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 TSPY5P-201ENST00000426936 936 ntBASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VTI1AQ96AJ9 AC091390.4-202ENST00000476426 537 ntBASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms