Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 AL671277.2-201ENST00000458060 996 ntBASIC33.16■■■□□ 2.9
TRIM41Q8WV44 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
TRIM41Q8WV44 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
TRIM41Q8WV44 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC33.15■■■□□ 2.9
TRIM41Q8WV44 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC33.15■■■□□ 2.9
TRIM41Q8WV44 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC33.15■■■□□ 2.9
TRIM41Q8WV44 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC33.15■■■□□ 2.9
TRIM41Q8WV44 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC33.15■■■□□ 2.9
TRIM41Q8WV44 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC33.15■■■□□ 2.9
TRIM41Q8WV44 NIFKP9-201ENST00000419265 221 ntBASIC33.15■■■□□ 2.9
TRIM41Q8WV44 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC33.15■■■□□ 2.9
TRIM41Q8WV44 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC33.15■■■□□ 2.9
TRIM41Q8WV44 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC33.15■■■□□ 2.9
TRIM41Q8WV44 AC008622.2-201ENST00000617006 1229 ntBASIC33.15■■■□□ 2.9
TRIM41Q8WV44 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 AC112907.3-201ENST00000577781 2400 ntBASIC33.14■■■□□ 2.9
TRIM41Q8WV44 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 TUBB8P6-201ENST00000436895 1288 ntBASIC33.14■■■□□ 2.9
TRIM41Q8WV44 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 AL671883.3-201ENST00000603274 991 ntBASIC33.14■■■□□ 2.9
TRIM41Q8WV44 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
TRIM41Q8WV44 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
TRIM41Q8WV44 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
TRIM41Q8WV44 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
TRIM41Q8WV44 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
TRIM41Q8WV44 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC33.13■■■□□ 2.89
TRIM41Q8WV44 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC33.13■■■□□ 2.89
TRIM41Q8WV44 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC33.13■■■□□ 2.89
TRIM41Q8WV44 C2orf69P3-201ENST00000565542 1120 ntBASIC33.13■■■□□ 2.89
TRIM41Q8WV44 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC33.13■■■□□ 2.89
TRIM41Q8WV44 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC33.13■■■□□ 2.89
TRIM41Q8WV44 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
TRIM41Q8WV44 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
TRIM41Q8WV44 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC33.12■■■□□ 2.89
TRIM41Q8WV44 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC33.12■■■□□ 2.89
TRIM41Q8WV44 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
TRIM41Q8WV44 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
TRIM41Q8WV44 AC111152.3-201ENST00000569699 673 ntBASIC33.12■■■□□ 2.89
TRIM41Q8WV44 AL355385.1-201ENST00000606123 409 ntBASIC33.12■■■□□ 2.89
TRIM41Q8WV44 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC33.12■■■□□ 2.89
TRIM41Q8WV44 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 TCF3P1-201ENST00000423021 1937 ntBASIC33.11■■■□□ 2.89
TRIM41Q8WV44 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 FAAHP1-202ENST00000446499 1238 ntBASIC33.11■■■□□ 2.89
TRIM41Q8WV44 EGLN1P1-201ENST00000531623 762 ntBASIC33.11■■■□□ 2.89
TRIM41Q8WV44 CKBP1-201ENST00000565489 1086 ntBASIC33.11■■■□□ 2.89
TRIM41Q8WV44 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC33.11■■■□□ 2.89
TRIM41Q8WV44 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 AC009237.14-201ENST00000609975 1594 ntBASIC33.1■■■□□ 2.89
TRIM41Q8WV44 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 PRR29-207ENST00000580752 458 ntTSL 3 BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC33.1■■■□□ 2.89
TRIM41Q8WV44 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC33.09■■■□□ 2.89
TRIM41Q8WV44 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms