Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
BEST2Q8NFU1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BEST2Q8NFU1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 FAM210CP-201ENST00000445714 574 ntBASIC20.83■□□□□ 0.93
BEST2Q8NFU1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
BEST2Q8NFU1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
BEST2Q8NFU1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BEST2Q8NFU1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
BEST2Q8NFU1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BEST2Q8NFU1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BEST2Q8NFU1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BEST2Q8NFU1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
BEST2Q8NFU1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
BEST2Q8NFU1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 ZNF815P-204ENST00000434898 1737 ntBASIC20.82■□□□□ 0.92
BEST2Q8NFU1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 FAM207BP-201ENST00000447172 505 ntBASIC20.82■□□□□ 0.92
BEST2Q8NFU1 AC091390.4-202ENST00000476426 537 ntBASIC20.82■□□□□ 0.92
BEST2Q8NFU1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 FITM1-202ENST00000559294 800 ntBASIC20.82■□□□□ 0.92
BEST2Q8NFU1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 AP000692.2-201ENST00000608391 879 ntBASIC20.82■□□□□ 0.92
BEST2Q8NFU1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
BEST2Q8NFU1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 AC008040.2-201ENST00000461049 708 ntBASIC20.81■□□□□ 0.92
BEST2Q8NFU1 AC097488.1-201ENST00000507834 756 ntBASIC20.81■□□□□ 0.92
BEST2Q8NFU1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BEST2Q8NFU1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 AL390955.1-201ENST00000428694 934 ntBASIC20.8■□□□□ 0.92
BEST2Q8NFU1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.8■□□□□ 0.92
BEST2Q8NFU1 AC104417.2-201ENST00000562989 1793 ntBASIC20.8■□□□□ 0.92
BEST2Q8NFU1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.79■□□□□ 0.92
BEST2Q8NFU1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BEST2Q8NFU1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.79■□□□□ 0.92
BEST2Q8NFU1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BEST2Q8NFU1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BEST2Q8NFU1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BEST2Q8NFU1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms