Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS1Q8NFJ9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.4■□□□□ 0.38
BBS1Q8NFJ9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BBS1Q8NFJ9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
BBS1Q8NFJ9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
BBS1Q8NFJ9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BBS1Q8NFJ9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.39■□□□□ 0.38
BBS1Q8NFJ9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.39■□□□□ 0.38
BBS1Q8NFJ9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 AC004911.1-201ENST00000416316 871 ntBASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BBS1Q8NFJ9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 AC026271.2-201ENST00000428091 497 ntBASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BBS1Q8NFJ9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 FP475955.4-201ENST00000623131 1990 ntBASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 SDHAP1-207ENST00000440850 2000 ntBASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 AC026471.1-201ENST00000564629 3026 ntBASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.37■□□□□ 0.37
BBS1Q8NFJ9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BBS1Q8NFJ9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
BBS1Q8NFJ9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms