Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS37AQ8NEZ2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
VPS37AQ8NEZ2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS37AQ8NEZ2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS37AQ8NEZ2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS37AQ8NEZ2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS37AQ8NEZ2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS37AQ8NEZ2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS37AQ8NEZ2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS37AQ8NEZ2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.43■□□□□ 0.54
VPS37AQ8NEZ2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 MIR4758-201ENST00000577688 71 ntBASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VPS37AQ8NEZ2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 ZNF815P-204ENST00000434898 1737 ntBASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 RPS2P52-201ENST00000469610 820 ntBASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 AC091874.3-201ENST00000512672 1195 ntBASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 AC006557.6-201ENST00000623071 864 ntBASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VPS37AQ8NEZ2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 AP006587.1-201ENST00000534129 1502 ntBASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 AC097658.1-201ENST00000475555 843 ntBASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 AL121906.2-201ENST00000621597 723 ntBASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VPS37AQ8NEZ2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
VPS37AQ8NEZ2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS37AQ8NEZ2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VPS37AQ8NEZ2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
VPS37AQ8NEZ2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS37AQ8NEZ2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS37AQ8NEZ2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS37AQ8NEZ2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
VPS37AQ8NEZ2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS37AQ8NEZ2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS37AQ8NEZ2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS37AQ8NEZ2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS37AQ8NEZ2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms