Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTL9Q8NET4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTL9Q8NET4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTL9Q8NET4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTL9Q8NET4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.83■■□□□ 1.41
RTL9Q8NET4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTL9Q8NET4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
RTL9Q8NET4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.83■■□□□ 1.41
RTL9Q8NET4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RTL9Q8NET4 NMU-205ENST00000511469 756 ntTSL 3 BASIC23.83■■□□□ 1.41
RTL9Q8NET4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.83■■□□□ 1.41
RTL9Q8NET4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.83■■□□□ 1.41
RTL9Q8NET4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.83■■□□□ 1.41
RTL9Q8NET4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTL9Q8NET4 AC141257.4-201ENST00000634557 245 ntBASIC23.83■■□□□ 1.41
RTL9Q8NET4 AC136944.6-201ENST00000634818 245 ntBASIC23.83■■□□□ 1.41
RTL9Q8NET4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTL9Q8NET4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.83■■□□□ 1.41
RTL9Q8NET4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTL9Q8NET4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTL9Q8NET4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
RTL9Q8NET4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.83■■□□□ 1.4
RTL9Q8NET4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTL9Q8NET4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RTL9Q8NET4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.82■■□□□ 1.4
RTL9Q8NET4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 YBX1P2-201ENST00000489612 999 ntBASIC23.82■■□□□ 1.4
RTL9Q8NET4 AP003041.3-201ENST00000527151 707 ntBASIC23.82■■□□□ 1.4
RTL9Q8NET4 AL512604.3-201ENST00000569583 964 ntBASIC23.82■■□□□ 1.4
RTL9Q8NET4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.82■■□□□ 1.4
RTL9Q8NET4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RTL9Q8NET4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.82■■□□□ 1.4
RTL9Q8NET4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 ZNF815P-204ENST00000434898 1737 ntBASIC23.82■■□□□ 1.4
RTL9Q8NET4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTL9Q8NET4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 UPK3BP1-201ENST00000428678 509 ntBASIC23.81■■□□□ 1.4
RTL9Q8NET4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RTL9Q8NET4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.81■■□□□ 1.4
RTL9Q8NET4 AC139887.4-201ENST00000607877 719 ntBASIC23.81■■□□□ 1.4
RTL9Q8NET4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RTL9Q8NET4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RTL9Q8NET4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
RTL9Q8NET4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RTL9Q8NET4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTL9Q8NET4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL9Q8NET4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL9Q8NET4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RTL9Q8NET4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RTL9Q8NET4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.8■■□□□ 1.4
RTL9Q8NET4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RTL9Q8NET4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.8■■□□□ 1.4
RTL9Q8NET4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTL9Q8NET4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
RTL9Q8NET4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.8■■□□□ 1.4
RTL9Q8NET4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL9Q8NET4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RTL9Q8NET4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL9Q8NET4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL9Q8NET4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RTL9Q8NET4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL9Q8NET4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 RNF152P1-201ENST00000397754 604 ntBASIC23.79■■□□□ 1.4
RTL9Q8NET4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RTL9Q8NET4 AL031133.1-201ENST00000406807 723 ntBASIC23.79■■□□□ 1.4
RTL9Q8NET4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RTL9Q8NET4 COX11P1-201ENST00000489116 835 ntBASIC23.79■■□□□ 1.4
RTL9Q8NET4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RTL9Q8NET4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RTL9Q8NET4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
RTL9Q8NET4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms