Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
CFAP43Q8NDM7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 FXN-203ENST00000396366 922 ntTSL 2 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 AP000347.1-202ENST00000435868 847 ntBASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 CA15P1-201ENST00000481698 905 ntBASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 AC092667.1-201ENST00000434301 2586 ntBASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 CLDN5-201ENST00000403084 2357 ntBASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC30.33■■■□□ 2.45
CFAP43Q8NDM7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 AL353719.1-201ENST00000566847 864 ntBASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 AL031432.5-201ENST00000641059 760 ntBASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFAP43Q8NDM7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 KRT8P41-201ENST00000533985 1514 ntBASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC30.31■■■□□ 2.44
CFAP43Q8NDM7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 SPDYE13P-201ENST00000445314 798 ntBASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 PRSS44-201ENST00000515154 1146 ntBASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 AC111152.3-201ENST00000569699 673 ntBASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 AC004263.2-201ENST00000617183 678 ntBASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
CFAP43Q8NDM7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 RN7SL510P-201ENST00000581311 263 ntBASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 HYMAI.1-201ENST00000620949 238 ntBASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC30.29■■■□□ 2.44
CFAP43Q8NDM7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms