Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF169Q8NCN4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 AC006011.2-201ENST00000621313 1158 ntBASIC21.04■□□□□ 0.96
RNF169Q8NCN4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.04■□□□□ 0.96
RNF169Q8NCN4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF169Q8NCN4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 AC087388.1-201ENST00000571370 1112 ntBASIC21.03■□□□□ 0.96
RNF169Q8NCN4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF169Q8NCN4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 AC096733.2-201ENST00000609937 1394 ntBASIC21.02■□□□□ 0.96
RNF169Q8NCN4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 CCR12P-201ENST00000446203 998 ntBASIC21.02■□□□□ 0.96
RNF169Q8NCN4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 WWOX-216ENST00000569818 525 ntBASIC21.02■□□□□ 0.96
RNF169Q8NCN4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF169Q8NCN4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.02■□□□□ 0.95
RNF169Q8NCN4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
RNF169Q8NCN4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.02■□□□□ 0.95
RNF169Q8NCN4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF169Q8NCN4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
RNF169Q8NCN4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF169Q8NCN4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF169Q8NCN4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF169Q8NCN4 GABARAPL3-202ENST00000624044 1851 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms